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The map label for this gene is 15898035

Identifier: 15898035

GI number: 15898035

Start: 1023932

End: 1024519

Strand: Direct

Name: 15898035

Synonym: SSO1181

Alternate gene names: NA

Gene position: 1023932-1024519 (Clockwise)

Preceding gene: 15898030

Following gene: 15898036

Centisome position: 34.22

GC content: 38.27

Gene sequence:

>588_bases
ATGCTAAGACCTAAGGAAGCATGCCAACGTCTAGGAATATCCTATGCAACACTTAGAGAATACGTTAAGAAAGGATACAT
AAAACCAGTTATACTACAGAGCGGAAAATGGAGATTCAGAGAAGAAGACGTAGAGAGGCTAATGGGAATTATTAGAAAAA
GAAAAGTAATACTTTACGCTAGAGTATCATCAAACACACAAAAAGACGATCTAGTAAACCAAGTTAAGTACCTAGAGGAA
CAAGTCAAAGAATACGACCTCGTAATTACTGACATAGGTTCCAAGTTAAACATGAAGAGAAAGGGGTTCTTGAAGTTGTT
GAGAATGATACTGAACAACGAAGTATCACGCGTAGTTGTTACTTACTCAGATAGGCTAGTCAGATTCGGCTTCGAAATCC
TCGAAGAGGTCTGCAAAGCACACAACTGTGAAATAGTAGTACTAAACCAAGAGGACAAAGAGGAAGAATTGGTCGAAGAC
TTAGTCTCAATACTAGTCTCGCTCAGCGGGAAACTGTATGGTATGAGAAGTCATGAATACGAAAAGGTGAAGAAATGTGC
TGAAGAACTTAAGAATTGGAAAATTTGA

Upstream 100 bases:

>100_bases
CGCAAAGGATAAGAAGGATAGTGCCATTCCTATGAAGCCGTTGCCAACAGTTTCCGATAAACCGTAAAGTTTATATTATT
TTGCCACAAACTCTTATACA

Downstream 100 bases:

>100_bases
ACCGGAAGAGGAATACGTGCACTTCACGTACTCCATCAAGAATAGTGAGAGGGAGAAGAGCAAAGAGTTAATTAAAGAAT
ACAGAACACTACTACAGAAA

Product: transposon ISC1778 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSNTQKDDLVNQVKYLEE
QVKEYDLVITDIGSKLNMKRKGFLKLLRMILNNEVSRVVVTYSDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LVSILVSLSGKLYGMRSHEYEKVKKCAEELKNWKI

Sequences:

>Translated_195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSNTQKDDLVNQVKYLEE
QVKEYDLVITDIGSKLNMKRKGFLKLLRMILNNEVSRVVVTYSDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LVSILVSLSGKLYGMRSHEYEKVKKCAEELKNWKI
>Mature_195_residues
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYARVSSNTQKDDLVNQVKYLEE
QVKEYDLVITDIGSKLNMKRKGFLKLLRMILNNEVSRVVVTYSDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVED
LVSILVSLSGKLYGMRSHEYEKVKKCAEELKNWKI

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 22977; Mature: 22977

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEEEE
RVSSNTQKDDLVNQVKYLEEQVKEYDLVITDIGSKLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHECCCCCCCCCHHHHHHHHHHHHCCCHHEEEE
TYSDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVEDLVSILVSLSGKLYGMRSHEY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
EKVKKCAEELKNWKI
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRPKEACQRLGISYATLREYVKKGYIKPVILQSGKWRFREEDVERLMGIIRKRKVILYA
CCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHEEEE
RVSSNTQKDDLVNQVKYLEEQVKEYDLVITDIGSKLNMKRKGFLKLLRMILNNEVSRVVV
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHECCCCCCCCCHHHHHHHHHHHHCCCHHEEEE
TYSDRLVRFGFEILEEVCKAHNCEIVVLNQEDKEEELVEDLVSILVSLSGKLYGMRSHEY
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH
EKVKKCAEELKNWKI
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]