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The map label for this gene is rpl15p

Identifier: 15897602

GI number: 15897602

Start: 601227

End: 601661

Strand: Reverse

Name: rpl15p

Synonym: SSO0696

Alternate gene names: 15897602

Gene position: 601661-601227 (Counterclockwise)

Preceding gene: 15897603

Following gene: 15897601

Centisome position: 20.11

GC content: 36.09

Gene sequence:

>435_bases
ATGGTAGTAAGAAGAGAGAAAAAGAGTAGAAAAATGAGAGGATCACGAACAATGGGATGGGGTATTAGAGGGCAGCATAG
AGATAGAGGTTCACAAGGTGGTAGGCAAATTGGTATGCACAAGGAGAAATGGTCATGGTTAGTTAAATATGGCAAAGGAT
GGTATGGTAAGCACGGATTCAGAAATCCAACTACAAAGTTAACAAGCGCTATTTCATTGAGGAAATTAAATGAGTTATTA
GAAAGTGGTTATATAAAAATTAAGGAAATGGATGGAAAAAAGATAGTAGACTTAAACGAGTTAGGGTATAATAAATTACT
TGGTGGAGGTAGTATAAGTATTCCCGTTACTATAAAAGTAGGTAAGGCTACTAATAAGGCAATACAGAAAGTGAAGGAGA
TGGGAGGAGAAGTAATATTAAGCCCAACTGAGTAA

Upstream 100 bases:

>100_bases
GAGGGTTTAAGGGGAGTGTTAAAAGGCCCTATAAAAATAAAGGTGAGTTTGGATATAGGGGAGATAAGATAAACGAATTA
ATGAGGAGGATGGTGTAAGG

Downstream 100 bases:

>100_bases
TTTTTTTGAGTAAATTATGTCATTCATCGATTCACTCGCTACTCTTGGACAATACTTACCAGCAGTTACTAAACCCAAAG
AGAAACCTTCACTTGGTCAA

Product: 50S ribosomal protein L15P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGFRNPTTKLTSAISLRKLNELL
ESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIPVTIKVGKATNKAIQKVKEMGGEVILSPTE

Sequences:

>Translated_144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGFRNPTTKLTSAISLRKLNELL
ESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIPVTIKVGKATNKAIQKVKEMGGEVILSPTE
>Mature_144_residues
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGFRNPTTKLTSAISLRKLNELL
ESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIPVTIKVGKATNKAIQKVKEMGGEVILSPTE

Specific function: Binds to the 23S rRNA

COG id: COG0200

COG function: function code J; Ribosomal protein L15

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L15P family

Homologues:

Organism=Drosophila melanogaster, GI17136880, Length=147, Percent_Identity=36.0544217687075, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL15_SULSO (Q9UX85)

Other databases:

- EMBL:   Y18930
- EMBL:   AE006641
- PIR:   F90217
- RefSeq:   NP_342207.1
- ProteinModelPortal:   Q9UX85
- SMR:   Q9UX85
- GeneID:   1454964
- GenomeReviews:   AE006641_GR
- KEGG:   sso:SSO0696
- NMPDR:   fig|273057.1.peg.630
- HOGENOM:   HBG727142
- OMA:   VGFHKHK
- PhylomeDB:   Q9UX85
- ProtClustDB:   PRK06419
- BioCyc:   SSOL273057:SSO0696-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_01341_A
- InterPro:   IPR001196
- InterPro:   IPR021131

Pfam domain/function: PF00828 Ribosomal_L18e; SSF52080 Ribosomal_L18e/L15

EC number: NA

Molecular weight: Translated: 16197; Mature: 16197

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: PS00475 RIBOSOMAL_L15

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGF
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
RNPTTKLTSAISLRKLNELLESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIPVTIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHCCHHHCCCCCCEEEEEEEEE
GKATNKAIQKVKEMGGEVILSPTE
CCCHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MVVRREKKSRKMRGSRTMGWGIRGQHRDRGSQGGRQIGMHKEKWSWLVKYGKGWYGKHGF
CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC
RNPTTKLTSAISLRKLNELLESGYIKIKEMDGKKIVDLNELGYNKLLGGGSISIPVTIKV
CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEHHHCCHHHCCCCCCEEEEEEEEE
GKATNKAIQKVKEMGGEVILSPTE
CCCHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10701121; 11427726