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The map label for this gene is rpl30p [H]

Identifier: 15897603

GI number: 15897603

Start: 601664

End: 602140

Strand: Reverse

Name: rpl30p [H]

Synonym: SSO0697

Alternate gene names: 15897603

Gene position: 602140-601664 (Counterclockwise)

Preceding gene: 15897604

Following gene: 15897602

Centisome position: 20.12

GC content: 34.17

Gene sequence:

>477_bases
GTGGTGGAGTTATTAGGCATAATTAGGATTAGAGGTTGGGCGAAGGCCCCTTGGTATATTAATGAAACATTAAATATGTT
GAGATTAAGGTATAATTTCAATACCATGGTATATCCAAAAACGTCTCAAATACTTGGTATGCTGAATAAAGTTTCTCCAT
ATATTACATGGGGTGAGATAGATCCAGATACTTTAAAGCTACTAATTATAAATAGACTTGAAACGGTAAAAGGGGATAAG
GTTTCGGATAGTTATGTGAAAGAAGTGTTGAAGATAGAAAATATTGATGCAATGGTAAAACAATTGTATGAGGGTAAAAT
TTACTTACATAAACTTGATGAATATTTCAAGTTGCCTATTCGCTTGCATCCACCTAGAGGAGGGTTTAAGGGGAGTGTTA
AAAGGCCCTATAAAAATAAAGGTGAGTTTGGATATAGGGGAGATAAGATAAACGAATTAATGAGGAGGATGGTGTAA

Upstream 100 bases:

>100_bases
TAGAACTACAGAGAATTTTGTTAGAGCTGGATACAGTGCACTTTATAATACATATAAATTTGTTACTTTACAGGATTGGG
TTAGGAAGAGGTAAGCAGAA

Downstream 100 bases:

>100_bases
GGATGGTAGTAAGAAGAGAGAAAAAGAGTAGAAAAATGAGAGGATCACGAACAATGGGATGGGGTATTAGAGGGCAGCAT
AGAGATAGAGGTTCACAAGG

Product: 50S ribosomal protein L30P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MVELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDPDTLKLLIINRLETVKGDK
VSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPIRLHPPRGGFKGSVKRPYKNKGEFGYRGDKINELMRRMV

Sequences:

>Translated_158_residues
MVELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDPDTLKLLIINRLETVKGDK
VSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPIRLHPPRGGFKGSVKRPYKNKGEFGYRGDKINELMRRMV
>Mature_158_residues
MVELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEIDPDTLKLLIINRLETVKGDK
VSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPIRLHPPRGGFKGSVKRPYKNKGEFGYRGDKINELMRRMV

Specific function: Unknown

COG id: COG1841

COG function: function code J; Ribosomal protein L30/L7E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30P family [H]

Homologues:

Organism=Drosophila melanogaster, GI24583248, Length=167, Percent_Identity=29.3413173652695, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005997
- InterPro:   IPR023106
- InterPro:   IPR016082 [H]

Pfam domain/function: PF00327 Ribosomal_L30 [H]

EC number: NA

Molecular weight: Translated: 18596; Mature: 18596

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEI
CCCCEEEEEECCCCCCCEEHHHHHHHEEEEECCCEEEECCHHHHHHHHHHCCCEEEECCC
DPDTLKLLIINRLETVKGDKVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEEECHHHHCCCE
RLHPPRGGFKGSVKRPYKNKGEFGYRGDKINELMRRMV
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVELLGIIRIRGWAKAPWYINETLNMLRLRYNFNTMVYPKTSQILGMLNKVSPYITWGEI
CCCCEEEEEECCCCCCCEEHHHHHHHEEEEECCCEEEECCHHHHHHHHHHCCCEEEECCC
DPDTLKLLIINRLETVKGDKVSDSYVKEVLKIENIDAMVKQLYEGKIYLHKLDEYFKLPI
CHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHCCEEEEEECHHHHCCCE
RLHPPRGGFKGSVKRPYKNKGEFGYRGDKINELMRRMV
EEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA