| Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
|---|---|
| Accession | NC_002754 |
| Length | 2,992,245 |
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The map label for this gene is hemA
Identifier: 15897131
GI number: 15897131
Start: 151633
End: 152913
Strand: Direct
Name: hemA
Synonym: SSO0180
Alternate gene names: 15897131
Gene position: 151633-152913 (Clockwise)
Preceding gene: 15897130
Following gene: 15897132
Centisome position: 5.07
GC content: 30.21
Gene sequence:
>1281_bases ATGAGCAAGGATGAAGAGTTACTACAAAATTATTGTTCGATTTTATTTACATACAAAACTATAGGAATAAGTAACCTTCA CTTATATTACTTTAGGGAAACGGAAATAAAATCGTTAAAACAATTAATCAATGCTGAATTTGCTATTCTACAAACTTGTA ATAGAGTTGAAATATATCTATATTCAGATACTAATACATTAAAGGAGGTTAATAAAATAATCCAATATTTGAATAACATA CATAATGAACCTATCGGAAATCAAGCTAGGGTACTCTGTGGTAAAGATGCTGCAAAACACTTATTTTTGGTAGCTAGTGG AGCTGATTCACTATCTATTGGAGAATACGAAATCTTATCTCAAATAAGATCTACTATTGATATGTTTAAAAAATTAGGCT TCAGCGGAAAATATTTACAAATATTTTTCGAAAGAGCAATTAAAGTAGGCAGAAAAGTTAGAGAAGAGACTAGTATTTCT AAGGGGAAAGTTGGTATATATTCTCTTGCTATTGATGAGGCTAAAAAACGATTCAATGATTTTTATGATAGAAGAATATT AGTAATAGGAGCTGGCGAAATGGCGCAGAAAATAACTAGTATGCTCCACAATGAAGGAGCCAAAGATGTTACAATAATGA ATAGAACAATAGAAAAGGCAAAACAACTTGCACTAAAGTTCGGCTATAACTACGAAAAATTAGATTTAGACAAGTTAGGT AACTTCGATGTCGCTTTTATATCAATTTATCATGAGAATCTTAGACTTGAGAACAAATGGAATACATTAATTGTTGATAT AACTGTCCCGCCCCTATTTACTGGGAATAACGTAATTACACTAGAAGAATTAGAAAGAATATCAAACCTCAACTTCAAAG CTAGAGAAGAGGAATTAGCTAAAATTAATAAATTGGTAGAGGATGGAATAAATGAATTACTATATGATTACAAAAAAGAA ATCTATACGGAATTCATGTCAAAAATAATGAAAAGGATAGAAACTATAAGAGAAAACGAGATTCTAAGAGCGTATAAAGA ACTTGAGAAACTTGGAATAAACGACCAACAAGCGAAGGAAATACTAGATTTGATGACTAGATCAATCATTAAAAAGTCAT TCCAACCCCTTTTCGATAATATAAGATCACTAATATTTAACGGAGAAAATTCGATAAACTACATTAACTTTCTAATTGAT ATTTTTAAAGATGGTAACATTTCCGGTTTTGAGACCGAGAAGATTAAGGAAAAGCAAGTTAGTGAGAGATCTAGTATCTG A
Upstream 100 bases:
>100_bases TATTCATTATATCATAAAATATATAATGATGAAAAATTCAAATATTATGCTACTAATGGTTTAATAAATAAAGCATTAAA TAGAGCGGAGGAGATAATTA
Downstream 100 bases:
>100_bases AACATCTATTTCACAAAACGATTTAGTACTTCCAGTATTTATAAAGGAAAACATAAATGAGCCAGAGCAAATTGCTTCGA TGCCAGGTATATATAGATAT
Product: glutamyl-tRNA reductase
Products: NA
Alternate protein names: GluTR
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MSKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYLYSDTNTLKEVNKIIQYLNNI HNEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILSQIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSIS KGKVGIYSLAIDEAKKRFNDFYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLG NFDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELAKINKLVEDGINELLYDYKKE IYTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKEILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLID IFKDGNISGFETEKIKEKQVSERSSI
Sequences:
>Translated_426_residues MSKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYLYSDTNTLKEVNKIIQYLNNI HNEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILSQIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSIS KGKVGIYSLAIDEAKKRFNDFYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLG NFDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELAKINKLVEDGINELLYDYKKE IYTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKEILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLID IFKDGNISGFETEKIKEKQVSERSSI >Mature_425_residues SKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYLYSDTNTLKEVNKIIQYLNNIH NEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILSQIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSISK GKVGIYSLAIDEAKKRFNDFYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLGN FDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELAKINKLVEDGINELLYDYKKEI YTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKEILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLIDI FKDGNISGFETEKIKEKQVSERSSI
Specific function: Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
COG id: COG0373
COG function: function code H; Glutamyl-tRNA reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamyl-tRNA reductase family
Homologues:
Organism=Escherichia coli, GI1787461, Length=334, Percent_Identity=26.6467065868263, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEM1_SULSO (Q980U7)
Other databases:
- EMBL: AE006641 - PIR: G90158 - RefSeq: NP_341736.1 - ProteinModelPortal: Q980U7 - SMR: Q980U7 - GeneID: 1455336 - GenomeReviews: AE006641_GR - KEGG: sso:SSO0180 - NMPDR: fig|273057.1.peg.159 - HOGENOM: HBG553533 - OMA: GEDQIIG - ProtClustDB: PRK00045 - BioCyc: SSOL273057:SSO0180-MONOMER - BRENDA: 1.2.1.70 - GO: GO:0005737 - HAMAP: MF_00087 - InterPro: IPR000343 - InterPro: IPR015896 - InterPro: IPR015895 - InterPro: IPR016040 - InterPro: IPR018214 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000445 - TIGRFAMs: TIGR01035
Pfam domain/function: PF00745 GlutR_dimer; PF05201 GlutR_N; PF01488 Shikimate_DH; SSF69075 4pyrrol_synth_GluRdtase_C; SSF69742 GlutR
EC number: =1.2.1.70
Molecular weight: Translated: 49423; Mature: 49291
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00747 GLUTR
Important sites: ACT_SITE 53-53 BINDING 110-110 BINDING 121-121
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYL CCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHCCHHHHHHCCCCEEEEE YSDTNTLKEVNKIIQYLNNIHNEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILS ECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHH QIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSISKGKVGIYSLAIDEAKKRFND HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH FYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLG HHCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHCC NFDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELA CCCEEEEEEEHHHCEEECCCCEEEEEEEECCEECCCCEEEHHHHHHHHCCCCCHHHHHHH KINKLVEDGINELLYDYKKEIYTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLIDIFKDGNISGFETEKIKEKQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SERSSI HHHCCC >Mature Secondary Structure SKDEELLQNYCSILFTYKTIGISNLHLYYFRETEIKSLKQLINAEFAILQTCNRVEIYL CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHCCHHHHHHCCCCEEEEE YSDTNTLKEVNKIIQYLNNIHNEPIGNQARVLCGKDAAKHLFLVASGADSLSIGEYEILS ECCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHH QIRSTIDMFKKLGFSGKYLQIFFERAIKVGRKVREETSISKGKVGIYSLAIDEAKKRFND HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHH FYDRRILVIGAGEMAQKITSMLHNEGAKDVTIMNRTIEKAKQLALKFGYNYEKLDLDKLG HHCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEECHHHCC NFDVAFISIYHENLRLENKWNTLIVDITVPPLFTGNNVITLEELERISNLNFKAREEELA CCCEEEEEEEHHHCEEECCCCEEEEEEEECCEECCCCEEEHHHHHHHHCCCCCHHHHHHH KINKLVEDGINELLYDYKKEIYTEFMSKIMKRIETIRENEILRAYKELEKLGINDQQAKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILDLMTRSIIKKSFQPLFDNIRSLIFNGENSINYINFLIDIFKDGNISGFETEKIKEKQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH SERSSI HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11427726