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The map label for this gene is yeaW [H]

Identifier: 16127352

GI number: 16127352

Start: 3358712

End: 3359926

Strand: Direct

Name: yeaW [H]

Synonym: CC_3122

Alternate gene names: 16127352

Gene position: 3358712-3359926 (Clockwise)

Preceding gene: 16127351

Following gene: 16127353

Centisome position: 83.61

GC content: 66.83

Gene sequence:

>1215_bases
GTGCTTGGCGCTTCACAACCTTACGATCTGGGCCCCGGCATTCGCCGGGGAAGTCGGGGGAAAGGTGGCGCCATGACCCA
GATTCCCAACCATGACCCCCTCTCCGACTGGGGCCTGCCCGGCTGGATCTACACCAGCGAGCGGTTCTTCAAGGAAGAGC
AGGACAAGGTCTTCCGGCCGTCCTGGCAGATCGTCTGCCATCTGAACGACATCCCCAAGGCCGGCGACTTCCACACCTTC
GACTTCATCGGCGAGAGCCTGGTGGTCGTGCGCAGCAAGGACGGCGGGGTGCGGGCCTTCGCCAATGTCTGCCGCCACCG
GGGCGCGCGGCTGCTGGACGGCCCGGTCGGGCGCTGTGGCGGGCGGATCGTCTGCCCCTACCACGCCTGGACCTATGACC
TGGAGGGCCGGCTGATCGGCGTGCCGATGCGCGACGACTATCCCGCCCTCGACATGGCCAAGGAGGGCCTGGCGACGATC
GAGGTCGAGGTCTGGCGCGGCTTCGTCTTCGTCCGGCTGGAGGGCGACGGCCCGTCGGTGGCGACCATGATGGCGCCCTA
CGAAGATGAGGTGGCCCACTACCGCTTCGAGGAGTTGCAGCCGTTCGGCCGCGTGACGCTGCGCCCGCGCGCGGTGAACT
GGAAGAACATCAGCGACAACTATTCCGACGGCCTGCATATCCCCGTCGCCCATCCGGGCCTGACCCGGCTGTTCGGCAAG
GGCTATGGGGTCGAGGCCGAGGCCTATGTCGACAAGATGTGGGGCCAGCTGATCGACGAGCCTTCCGAGAGCCCGTCCGA
GCGCCTCTACCAGGACATCCTGCCCGACGTTGCGCACCTGCCGGGCGACCGCAAGCGGCTGTGGACCTATTTCAAGCTGT
GGCCGAACTTCGCCTTCGATATCTATCCGGACCAGGTGGACTTCATGCAGTTCATCCCGATCTCGGCCGAGCAGACGATG
ATCCGCGAGATCGCCTACGCCCTGCCCGACGATCGTCGCGAGATGAAGGCGGCGCGGTATCTGAACTGGCGCATCAACCG
GCAGGTCAACACCGAGGACACCGAACTGGTGGCCCGTGTCCAGCAGGGCATGGCCTCGCGCACCTTCACCGCCGGGCCGC
TGGCGACCAGCGAGGTCAGTTTGCGCAGCTTCGGCCGCAAGATGCGGGCCCTGATCCCGGAGAGCCGGATGCCGAGGCCG
CCGGAGGGGTGGTGA

Upstream 100 bases:

>100_bases
TTCGCCACGGCGGTGAAGCTGTCGGTGGTGGGGCGGTGATGGCGAAACATCCGACCTTCCCGGCGAATGCCGGGACTCAG
ATACACCCCGAGCCTATGCC

Downstream 100 bases:

>100_bases
GTTCATCACCTCGGCAAGATCACCGTGTCATCCCGGCCGTAGCGCAGCGGAGAGCCGGGACCCAGGGGGTGAGGAACCGC
CGGGGAAGCCGCCCCTGGGT

Product: Rieske 2Fe-2S family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MLGASQPYDLGPGIRRGSRGKGGAMTQIPNHDPLSDWGLPGWIYTSERFFKEEQDKVFRPSWQIVCHLNDIPKAGDFHTF
DFIGESLVVVRSKDGGVRAFANVCRHRGARLLDGPVGRCGGRIVCPYHAWTYDLEGRLIGVPMRDDYPALDMAKEGLATI
EVEVWRGFVFVRLEGDGPSVATMMAPYEDEVAHYRFEELQPFGRVTLRPRAVNWKNISDNYSDGLHIPVAHPGLTRLFGK
GYGVEAEAYVDKMWGQLIDEPSESPSERLYQDILPDVAHLPGDRKRLWTYFKLWPNFAFDIYPDQVDFMQFIPISAEQTM
IREIAYALPDDRREMKAARYLNWRINRQVNTEDTELVARVQQGMASRTFTAGPLATSEVSLRSFGRKMRALIPESRMPRP
PEGW

Sequences:

>Translated_404_residues
MLGASQPYDLGPGIRRGSRGKGGAMTQIPNHDPLSDWGLPGWIYTSERFFKEEQDKVFRPSWQIVCHLNDIPKAGDFHTF
DFIGESLVVVRSKDGGVRAFANVCRHRGARLLDGPVGRCGGRIVCPYHAWTYDLEGRLIGVPMRDDYPALDMAKEGLATI
EVEVWRGFVFVRLEGDGPSVATMMAPYEDEVAHYRFEELQPFGRVTLRPRAVNWKNISDNYSDGLHIPVAHPGLTRLFGK
GYGVEAEAYVDKMWGQLIDEPSESPSERLYQDILPDVAHLPGDRKRLWTYFKLWPNFAFDIYPDQVDFMQFIPISAEQTM
IREIAYALPDDRREMKAARYLNWRINRQVNTEDTELVARVQQGMASRTFTAGPLATSEVSLRSFGRKMRALIPESRMPRP
PEGW
>Mature_404_residues
MLGASQPYDLGPGIRRGSRGKGGAMTQIPNHDPLSDWGLPGWIYTSERFFKEEQDKVFRPSWQIVCHLNDIPKAGDFHTF
DFIGESLVVVRSKDGGVRAFANVCRHRGARLLDGPVGRCGGRIVCPYHAWTYDLEGRLIGVPMRDDYPALDMAKEGLATI
EVEVWRGFVFVRLEGDGPSVATMMAPYEDEVAHYRFEELQPFGRVTLRPRAVNWKNISDNYSDGLHIPVAHPGLTRLFGK
GYGVEAEAYVDKMWGQLIDEPSESPSERLYQDILPDVAHLPGDRKRLWTYFKLWPNFAFDIYPDQVDFMQFIPISAEQTM
IREIAYALPDDRREMKAARYLNWRINRQVNTEDTELVARVQQGMASRTFTAGPLATSEVSLRSFGRKMRALIPESRMPRP
PEGW

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=348, Percent_Identity=31.3218390804598, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1788888, Length=206, Percent_Identity=31.5533980582524, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 46029; Mature: 46029

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGASQPYDLGPGIRRGSRGKGGAMTQIPNHDPLSDWGLPGWIYTSERFFKEEQDKVFRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SWQIVCHLNDIPKAGDFHTFDFIGESLVVVRSKDGGVRAFANVCRHRGARLLDGPVGRCG
CEEEEEEECCCCCCCCEEEHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCHHCC
GRIVCPYHAWTYDLEGRLIGVPMRDDYPALDMAKEGLATIEVEVWRGFVFVRLEGDGPSV
CEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHCCCEEEEEEEECCEEEEEEECCCCCE
ATMMAPYEDEVAHYRFEELQPFGRVTLRPRAVNWKNISDNYSDGLHIPVAHPGLTRLFGK
EEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCC
GYGVEAEAYVDKMWGQLIDEPSESPSERLYQDILPDVAHLPGDRKRLWTYFKLWPNFAFD
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEE
IYPDQVDFMQFIPISAEQTMIREIAYALPDDRREMKAARYLNWRINRQVNTEDTELVARV
ECCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHH
QQGMASRTFTAGPLATSEVSLRSFGRKMRALIPESRMPRPPEGW
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLGASQPYDLGPGIRRGSRGKGGAMTQIPNHDPLSDWGLPGWIYTSERFFKEEQDKVFRP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC
SWQIVCHLNDIPKAGDFHTFDFIGESLVVVRSKDGGVRAFANVCRHRGARLLDGPVGRCG
CEEEEEEECCCCCCCCEEEHHHCCCEEEEEECCCCCHHHHHHHHHHCCCEECCCCCHHCC
GRIVCPYHAWTYDLEGRLIGVPMRDDYPALDMAKEGLATIEVEVWRGFVFVRLEGDGPSV
CEEEECCCEEEEECCCCEEEECCCCCCCHHHHHHCCCEEEEEEEECCEEEEEEECCCCCE
ATMMAPYEDEVAHYRFEELQPFGRVTLRPRAVNWKNISDNYSDGLHIPVAHPGLTRLFGK
EEEECCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCHHHHHCC
GYGVEAEAYVDKMWGQLIDEPSESPSERLYQDILPDVAHLPGDRKRLWTYFKLWPNFAFD
CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEE
IYPDQVDFMQFIPISAEQTMIREIAYALPDDRREMKAARYLNWRINRQVNTEDTELVARV
ECCCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHH
QQGMASRTFTAGPLATSEVSLRSFGRKMRALIPESRMPRPPEGW
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]