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The map label for this gene is p49 [H]

Identifier: 16127351

GI number: 16127351

Start: 3357019

End: 3358650

Strand: Direct

Name: p49 [H]

Synonym: CC_3121

Alternate gene names: 16127351

Gene position: 3357019-3358650 (Clockwise)

Preceding gene: 16127350

Following gene: 16127352

Centisome position: 83.57

GC content: 69.24

Gene sequence:

>1632_bases
ATGGCGGTCACCCAGACCCGCGACGCGGTCATCATCGGCGGCGGCCATAACGGCCTCGTCTGCGCCTTCTATCTGGCCAA
GGCCGGTCTGAAGGTCACGGTCTGCGAGGCGCGGGGCGTGGTAGGCGGCGCGGCGGTGACCGAAGAGTTCCACCCCGGTT
TCCGCAACTCGGTGGCCAGCTACACGGTCAGCCTCTTGAACCCGCGCGTGATCGCCGACATGGGCCTGCGCGAGCTTGGC
CTGACCTTCTTGGAACGGCCGATCTCGAACTTCCTGCCGATCAGCGACGATAAGTACATCAAGCTGGGCGGGGGCCTGGA
GCGCACCCAGGAGGAGTTCCGCAAGTACAGCCGCCGCGACGCCGAGGTGCTGCCGGCCTACTACGCGATGCTGGACGAGA
TCGGCGACATCCTGCGCGACCTGGCCCAGGAAACCCCGCCGAACCTGGGCGATGGTCTGCCTGGCCTGCTGCGCGCCCTG
CGCCAGGGCGGGCGGCTGGCCTTCCTGTCGCGTCAGCGCAAGCGCGACCTGCTGGACCTGTTCACCAAGAGCGCCCGCGA
CGTGCTGGACGGCTGGTTCGAGAGCGAGCCCGTCAAGGCCGCCTTCGGCTTCGACGCCGTGGTCGGCAACTTCGCCAGCC
CTGATACGCCGGGGTCGGCCTATGTGCTGCTGCACCACACCTTCGGCGAGGTGAACGGCAAGAAGGGCGCCTGGGGCCAC
GCGGTCGGCGGCATGGGCGCGATCACTCAAGCCATGGCGAAAGCCTGCGAGGCGGCCGGGGTCGAGATCCTGCTCGACGC
CCCGGTCGAGGCCGTCCACATCGACGGCGGCAAGGCGGCCGGGGTGCAACTGGTCGACGGCCGCCAGATCATGGCTCCGA
TCGTCAGCGCCAACGTCAATCCGGCCCTGCTCTACAAGAAACTGGTGCCGCCCTCGGCCCTGACGCCCGACTTCCGCAAG
GCGGTCGACGGCTACAAGAACGGCTCGGGCACCTTCCGGATGAACGTGGCGCTGTCGGAGCTGCCCAGCTTCACCTGCCT
GCCCGGCAAGGAAACCGCCGAGCACCACCAGTCGGGCATCGTGATCGCCCCCAGCCTCGACTACATGGACGCGGCCTATC
GCGACGCCAAGGGTCAGGGGATCAGCAAGGCCCCGATCGTCGAGATGCTGATCCCGTCCAGCCTGGACACCAGCCTGGCC
CCGCCCGGCCAGCACGTGGCCAGCCTGTTCTGCCAGCAGTTCGCGCCGGAGCTTCCCGATGGTCGTTCGTGGGACGACGC
GCGGGAGGCCGCCGCCGACCTGATCATCGACACGGTCGACCAGTGGGCGCCGGGCTTCAAGGCCTCGGTGCTGGGGCGGA
TGATCCTGTCGCCGCTGGACCTGGAGCGGAAGTTCGGCCTGATCGGCGGCGACATCATGCACGGCCACATGTCGCTGGAT
CAGCTGTGGGCCACGCGGCCGCTGCTGGGTCACGCCAGCCACCGCGCGCCGATTGCGGGCCTCTATATGTGCGGCGCGGG
CACGCATCCGGGCGGCGGGGTCTCGGGCAATCCGGGGCGGAACGCGGCGCGGGAGATCCTGCGCGACAAGGACTTCGCCA
CGGCGGTGAAGCTGTCGGTGGTGGGGCGGTGA

Upstream 100 bases:

>100_bases
TTCGCGCCACCTCCCCCGCCAGGGGGAGGATTTGGGCTGCCCCCTTGCCTATTATACGATCGTATAGCAACACTCTCCCC
ATCCTCGGGGAGAGCACACC

Downstream 100 bases:

>100_bases
TGGCGAAACATCCGACCTTCCCGGCGAATGCCGGGACTCAGATACACCCCGAGCCTATGCCGTGCTTGGCGCTTCACAAC
CTTACGATCTGGGCCCCGGC

Product: phytoene dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MAVTQTRDAVIIGGGHNGLVCAFYLAKAGLKVTVCEARGVVGGAAVTEEFHPGFRNSVASYTVSLLNPRVIADMGLRELG
LTFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRDAEVLPAYYAMLDEIGDILRDLAQETPPNLGDGLPGLLRAL
RQGGRLAFLSRQRKRDLLDLFTKSARDVLDGWFESEPVKAAFGFDAVVGNFASPDTPGSAYVLLHHTFGEVNGKKGAWGH
AVGGMGAITQAMAKACEAAGVEILLDAPVEAVHIDGGKAAGVQLVDGRQIMAPIVSANVNPALLYKKLVPPSALTPDFRK
AVDGYKNGSGTFRMNVALSELPSFTCLPGKETAEHHQSGIVIAPSLDYMDAAYRDAKGQGISKAPIVEMLIPSSLDTSLA
PPGQHVASLFCQQFAPELPDGRSWDDAREAAADLIIDTVDQWAPGFKASVLGRMILSPLDLERKFGLIGGDIMHGHMSLD
QLWATRPLLGHASHRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSVVGR

Sequences:

>Translated_543_residues
MAVTQTRDAVIIGGGHNGLVCAFYLAKAGLKVTVCEARGVVGGAAVTEEFHPGFRNSVASYTVSLLNPRVIADMGLRELG
LTFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRDAEVLPAYYAMLDEIGDILRDLAQETPPNLGDGLPGLLRAL
RQGGRLAFLSRQRKRDLLDLFTKSARDVLDGWFESEPVKAAFGFDAVVGNFASPDTPGSAYVLLHHTFGEVNGKKGAWGH
AVGGMGAITQAMAKACEAAGVEILLDAPVEAVHIDGGKAAGVQLVDGRQIMAPIVSANVNPALLYKKLVPPSALTPDFRK
AVDGYKNGSGTFRMNVALSELPSFTCLPGKETAEHHQSGIVIAPSLDYMDAAYRDAKGQGISKAPIVEMLIPSSLDTSLA
PPGQHVASLFCQQFAPELPDGRSWDDAREAAADLIIDTVDQWAPGFKASVLGRMILSPLDLERKFGLIGGDIMHGHMSLD
QLWATRPLLGHASHRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSVVGR
>Mature_542_residues
AVTQTRDAVIIGGGHNGLVCAFYLAKAGLKVTVCEARGVVGGAAVTEEFHPGFRNSVASYTVSLLNPRVIADMGLRELGL
TFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRDAEVLPAYYAMLDEIGDILRDLAQETPPNLGDGLPGLLRALR
QGGRLAFLSRQRKRDLLDLFTKSARDVLDGWFESEPVKAAFGFDAVVGNFASPDTPGSAYVLLHHTFGEVNGKKGAWGHA
VGGMGAITQAMAKACEAAGVEILLDAPVEAVHIDGGKAAGVQLVDGRQIMAPIVSANVNPALLYKKLVPPSALTPDFRKA
VDGYKNGSGTFRMNVALSELPSFTCLPGKETAEHHQSGIVIAPSLDYMDAAYRDAKGQGISKAPIVEMLIPSSLDTSLAP
PGQHVASLFCQQFAPELPDGRSWDDAREAAADLIIDTVDQWAPGFKASVLGRMILSPLDLERKFGLIGGDIMHGHMSLDQ
LWATRPLLGHASHRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSVVGR

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI229577391, Length=545, Percent_Identity=40.7339449541284, Blast_Score=390, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17540238, Length=536, Percent_Identity=39.9253731343284, Blast_Score=381, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57882; Mature: 57751

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTQTRDAVIIGGGHNGLVCAFYLAKAGLKVTVCEARGVVGGAAVTEEFHPGFRNSVAS
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHH
YTVSLLNPRVIADMGLRELGLTFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRD
HHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
AEVLPAYYAMLDEIGDILRDLAQETPPNLGDGLPGLLRALRQGGRLAFLSRQRKRDLLDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHH
FTKSARDVLDGWFESEPVKAAFGFDAVVGNFASPDTPGSAYVLLHHTFGEVNGKKGAWGH
HHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
AVGGMGAITQAMAKACEAAGVEILLDAPVEAVHIDGGKAAGVQLVDGRQIMAPIVSANVN
CCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEEECCCHHHHHHHHCCCC
PALLYKKLVPPSALTPDFRKAVDGYKNGSGTFRMNVALSELPSFTCLPGKETAEHHQSGI
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHHCCCEEECCCCHHHHHHCCCE
VIAPSLDYMDAAYRDAKGQGISKAPIVEMLIPSSLDTSLAPPGQHVASLFCQQFAPELPD
EEECCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GRSWDDAREAAADLIIDTVDQWAPGFKASVLGRMILSPLDLERKFGLIGGDIMHGHMSLD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHEECCCCHH
QLWATRPLLGHASHRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSV
HHHHHCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEE
VGR
CCC
>Mature Secondary Structure 
AVTQTRDAVIIGGGHNGLVCAFYLAKAGLKVTVCEARGVVGGAAVTEEFHPGFRNSVAS
CCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCCHHHHHHH
YTVSLLNPRVIADMGLRELGLTFLERPISNFLPISDDKYIKLGGGLERTQEEFRKYSRRD
HHHHHHCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCC
AEVLPAYYAMLDEIGDILRDLAQETPPNLGDGLPGLLRALRQGGRLAFLSRQRKRDLLDL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHHH
FTKSARDVLDGWFESEPVKAAFGFDAVVGNFASPDTPGSAYVLLHHTFGEVNGKKGAWGH
HHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
AVGGMGAITQAMAKACEAAGVEILLDAPVEAVHIDGGKAAGVQLVDGRQIMAPIVSANVN
CCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCEEEECCCHHHHHHHHCCCC
PALLYKKLVPPSALTPDFRKAVDGYKNGSGTFRMNVALSELPSFTCLPGKETAEHHQSGI
HHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEHHHCCCEEECCCCHHHHHHCCCE
VIAPSLDYMDAAYRDAKGQGISKAPIVEMLIPSSLDTSLAPPGQHVASLFCQQFAPELPD
EEECCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GRSWDDAREAAADLIIDTVDQWAPGFKASVLGRMILSPLDLERKFGLIGGDIMHGHMSLD
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHEECCCCHH
QLWATRPLLGHASHRAPIAGLYMCGAGTHPGGGVSGNPGRNAAREILRDKDFATAVKLSV
HHHHHCCHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHEEEEEE
VGR
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]