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The map label for this gene is phoD [H]

Identifier: 16125812

GI number: 16125812

Start: 1728242

End: 1729828

Strand: Direct

Name: phoD [H]

Synonym: CC_1565

Alternate gene names: 16125812

Gene position: 1728242-1729828 (Clockwise)

Preceding gene: 16125811

Following gene: 16125813

Centisome position: 43.02

GC content: 66.79

Gene sequence:

>1587_bases
ATGTCCGTCCTCGATCGCTACGCCCTGAGCCGTCGTCGCATGCTGGCGGTGTTTGGCGGGGCCGCTGTGTCCGCCATGGC
GATCCCGCTGGAGAGCGGCAAGGCCCTGGCTCAGGCGGTGTTCCAGACCTATCCGTTCCAACTGGGCGTGGCCTCCGGCG
ACCCGTCGTCGGATGGCTTTGTGATCTGGACGCGTCTGGCGCCCGAGCCGCTCGAGATCGGCTACGGCATGCCGTCCGCG
CCGGTCGCCGTCGAATGGGAAGTCGGTGACGCGCCCAACATGCGCAACATCGTGGCCAAGGGCACGGCCATCGCGCCGCC
GGAGCTGGGCCACGCGGTCCACGTCGAAGTCGGCGGCCTGCAGCCCAATCGGGACTACTGGTATCGCTTCACCGCCGGAC
GGGAGCGCAGCCTGCTGGGCCGGGCCCGCACGACGCCGGCGCTGGGCGCGGCGCTGGAGCGCGTGCGCTTCGCGGTGGCC
GGCTGCCAGCACTACGAGCAGGGCTACTATACGGCCTATCGCCGTCTGGCCGAAGAAAACCCCGACTTCGTCTTCTGCTA
CGGCGACTACATCTACGAGTATCGTGGCAACCGGGTCTGGAACAGCGCCAGCGGTCCGGTGGAGAACGTGCGCCAGCATT
TCGGCGGCGAGATCTACAGCCTCGACGACTATCGCCGCCGCTACGCCCAGTACAAGATGGACACCGACCTGCAGGCCGCC
CACGCGGCTGCGCCGTGGTTCACGGTCTGGGACGACCACGAGATCGACAACAACTGGGTCACTGACCTCGACCAGGACGG
CGTCGATCCCAAGATCTTCAACCTGCGCCGTCAGGCCGCCGTCCAGGCCTATTACGAGAACATGCCGCTGCGGGCCTCGA
GCTTCCCGACCGGCACGTCGCTGCAGATCTATCGCCGGGCGACCTATGGCCAGCTCTTGAACCTGAACCTGCTGGATACG
CGCCAGTATCGCACCGACCAGCCCTGCGGCGACCGGTTCGGCTACTGCGACGCGGTGGAGGCTTCGCGCGCCGAGGTCAT
CGGCCAGGTTCAGGAAAAGTGGCTGACCAACGGGCTGATCGAGTCCAAGTCGACCTGGAACGTGCTGGCCCAGCAGATCA
TGATGATGGACCTCGACCGCGAGCCGGGCGAGGGCAAGGCGGTCAATCCGGACTCGTGGGCCGGCTATCGCATGCCGCGC
AATCGCCTGCTGCAGACCATCCGCGACCGCAAGGTCGGCAATGTCGTGGTGCTCACCGGCGACGAGCACCAGAACTATGC
CGGCGATCTCTATCTCGACGGCGCCAAGGCCGAAGGGGCTCCGATCGCCTCGGAGTTTGTCGTCACCTCGATCAGCTCCG
GCGGCGACGGGGTCGACCAGCGCGCCGACATGGCCAGGATCCAGGCCGCCAACCCGATCCTCAAGTTCAACAACGCCCAG
CGCGGCTATGCGCTCTGCGACGTGACGCCCAAGGCGTTCGTGACCGAGTTCAAGGTGCTGGACGCGATCACCCGCCGGGA
CGGCAAGCTGTCGACTCGGGCCAAATGGGCGCTGGAAGCCGGAAAGACGGGGATCGTTCAGGCCTAA

Upstream 100 bases:

>100_bases
CCAGGCTCTGGCTGTTGGATCGCCTGGCCGAGGCCGATAAGCTCTAAGAACCGTCACAAAGCGGCGCTATCGCGAATTCT
CAGTCTATTGGAGTAACGCC

Downstream 100 bases:

>100_bases
CCGCTCGAATCATCGAGGGGGTTTCTGCTAGGCTCCTTCCCCGGAGTAACGAATCCCCTCGATGAACAAGCCTGTCCTTC
CTCCCCCCGGCGGCCCCGAC

Product: alkaline phosphatase D

Products: NA

Alternate protein names: APaseD [H]

Number of amino acids: Translated: 528; Mature: 527

Protein sequence:

>528_residues
MSVLDRYALSRRRMLAVFGGAAVSAMAIPLESGKALAQAVFQTYPFQLGVASGDPSSDGFVIWTRLAPEPLEIGYGMPSA
PVAVEWEVGDAPNMRNIVAKGTAIAPPELGHAVHVEVGGLQPNRDYWYRFTAGRERSLLGRARTTPALGAALERVRFAVA
GCQHYEQGYYTAYRRLAEENPDFVFCYGDYIYEYRGNRVWNSASGPVENVRQHFGGEIYSLDDYRRRYAQYKMDTDLQAA
HAAAPWFTVWDDHEIDNNWVTDLDQDGVDPKIFNLRRQAAVQAYYENMPLRASSFPTGTSLQIYRRATYGQLLNLNLLDT
RQYRTDQPCGDRFGYCDAVEASRAEVIGQVQEKWLTNGLIESKSTWNVLAQQIMMMDLDREPGEGKAVNPDSWAGYRMPR
NRLLQTIRDRKVGNVVVLTGDEHQNYAGDLYLDGAKAEGAPIASEFVVTSISSGGDGVDQRADMARIQAANPILKFNNAQ
RGYALCDVTPKAFVTEFKVLDAITRRDGKLSTRAKWALEAGKTGIVQA

Sequences:

>Translated_528_residues
MSVLDRYALSRRRMLAVFGGAAVSAMAIPLESGKALAQAVFQTYPFQLGVASGDPSSDGFVIWTRLAPEPLEIGYGMPSA
PVAVEWEVGDAPNMRNIVAKGTAIAPPELGHAVHVEVGGLQPNRDYWYRFTAGRERSLLGRARTTPALGAALERVRFAVA
GCQHYEQGYYTAYRRLAEENPDFVFCYGDYIYEYRGNRVWNSASGPVENVRQHFGGEIYSLDDYRRRYAQYKMDTDLQAA
HAAAPWFTVWDDHEIDNNWVTDLDQDGVDPKIFNLRRQAAVQAYYENMPLRASSFPTGTSLQIYRRATYGQLLNLNLLDT
RQYRTDQPCGDRFGYCDAVEASRAEVIGQVQEKWLTNGLIESKSTWNVLAQQIMMMDLDREPGEGKAVNPDSWAGYRMPR
NRLLQTIRDRKVGNVVVLTGDEHQNYAGDLYLDGAKAEGAPIASEFVVTSISSGGDGVDQRADMARIQAANPILKFNNAQ
RGYALCDVTPKAFVTEFKVLDAITRRDGKLSTRAKWALEAGKTGIVQA
>Mature_527_residues
SVLDRYALSRRRMLAVFGGAAVSAMAIPLESGKALAQAVFQTYPFQLGVASGDPSSDGFVIWTRLAPEPLEIGYGMPSAP
VAVEWEVGDAPNMRNIVAKGTAIAPPELGHAVHVEVGGLQPNRDYWYRFTAGRERSLLGRARTTPALGAALERVRFAVAG
CQHYEQGYYTAYRRLAEENPDFVFCYGDYIYEYRGNRVWNSASGPVENVRQHFGGEIYSLDDYRRRYAQYKMDTDLQAAH
AAAPWFTVWDDHEIDNNWVTDLDQDGVDPKIFNLRRQAAVQAYYENMPLRASSFPTGTSLQIYRRATYGQLLNLNLLDTR
QYRTDQPCGDRFGYCDAVEASRAEVIGQVQEKWLTNGLIESKSTWNVLAQQIMMMDLDREPGEGKAVNPDSWAGYRMPRN
RLLQTIRDRKVGNVVVLTGDEHQNYAGDLYLDGAKAEGAPIASEFVVTSISSGGDGVDQRADMARIQAANPILKFNNAQR
GYALCDVTPKAFVTEFKVLDAITRRDGKLSTRAKWALEAGKTGIVQA

Specific function: Unknown

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.3.1 [H]

Molecular weight: Translated: 58824; Mature: 58693

Theoretical pI: Translated: 6.21; Mature: 6.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLDRYALSRRRMLAVFGGAAVSAMAIPLESGKALAQAVFQTYPFQLGVASGDPSSDGF
CCHHHHHHHHHHHEEEEECCHHHEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCE
VIWTRLAPEPLEIGYGMPSAPVAVEWEVGDAPNMRNIVAKGTAIAPPELGHAVHVEVGGL
EEEEECCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
QPNRDYWYRFTAGRERSLLGRARTTPALGAALERVRFAVAGCQHYEQGYYTAYRRLAEEN
CCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDFVFCYGDYIYEYRGNRVWNSASGPVENVRQHFGGEIYSLDDYRRRYAQYKMDTDLQAA
CCEEEEECCEEEEECCCEEECCCCCCHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHH
HAAAPWFTVWDDHEIDNNWVTDLDQDGVDPKIFNLRRQAAVQAYYENMPLRASSFPTGTS
HCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LQIYRRATYGQLLNLNLLDTRQYRTDQPCGDRFGYCDAVEASRAEVIGQVQEKWLTNGLI
EEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH
ESKSTWNVLAQQIMMMDLDREPGEGKAVNPDSWAGYRMPRNRLLQTIRDRKVGNVVVLTG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
DEHQNYAGDLYLDGAKAEGAPIASEFVVTSISSGGDGVDQRADMARIQAANPILKFNNAQ
CCCCCCCCCEEEECCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCC
RGYALCDVTPKAFVTEFKVLDAITRRDGKLSTRAKWALEAGKTGIVQA
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVLDRYALSRRRMLAVFGGAAVSAMAIPLESGKALAQAVFQTYPFQLGVASGDPSSDGF
CHHHHHHHHHHHEEEEECCHHHEEEEEECCCCHHHHHHHHHHCCEEEEECCCCCCCCCE
VIWTRLAPEPLEIGYGMPSAPVAVEWEVGDAPNMRNIVAKGTAIAPPELGHAVHVEVGGL
EEEEECCCCHHHCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
QPNRDYWYRFTAGRERSLLGRARTTPALGAALERVRFAVAGCQHYEQGYYTAYRRLAEEN
CCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDFVFCYGDYIYEYRGNRVWNSASGPVENVRQHFGGEIYSLDDYRRRYAQYKMDTDLQAA
CCEEEEECCEEEEECCCEEECCCCCCHHHHHHHHCCCEEECHHHHHHHHHHCCCCCHHHH
HAAAPWFTVWDDHEIDNNWVTDLDQDGVDPKIFNLRRQAAVQAYYENMPLRASSFPTGTS
HCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LQIYRRATYGQLLNLNLLDTRQYRTDQPCGDRFGYCDAVEASRAEVIGQVQEKWLTNGLI
EEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHH
ESKSTWNVLAQQIMMMDLDREPGEGKAVNPDSWAGYRMPRNRLLQTIRDRKVGNVVVLTG
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEC
DEHQNYAGDLYLDGAKAEGAPIASEFVVTSISSGGDGVDQRADMARIQAANPILKFNNAQ
CCCCCCCCCEEEECCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCC
RGYALCDVTPKAFVTEFKVLDAITRRDGKLSTRAKWALEAGKTGIVQA
CCEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760916; 9384377; 7704254; 25878 [H]