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The map label for this gene is glyQ

Identifier: 16125590

GI number: 16125590

Start: 1494958

End: 1495857

Strand: Direct

Name: glyQ

Synonym: CC_1341

Alternate gene names: 16125590

Gene position: 1494958-1495857 (Clockwise)

Preceding gene: 16125586

Following gene: 16125591

Centisome position: 37.22

GC content: 65.11

Gene sequence:

>900_bases
ATGTCGCGCGAAAAACCCAAGTCCTTCCAAAGCCTGATCCTGACGCTCCATGACTATTGGAGCCGGCAGGGCTGCGTCAT
CCTGCAGCCGCACGACGTGGAAGTGGGGGCGGGGACCCTGCACCCGGCCACGGTGCTGCGCGCTCTTGGCCCCAAGGCCT
GGAACGCGGCCTATGTGCAGCCCTCGCGCCGTCCGGGCGATGGCCGCTATGGCGAGAACCCTAACCGCCTGCAGCACTAC
TATCAGTATCAGGTGATCCTGAAGCCGAACCCCGAGAACATGCAGGACCTGTATCTGGGTTCGCTGGAAGCGATCGGCCT
GGACCTGCGCACCCACGACATCCGCTTCGTCGAGGACGACTGGGAGAACCCCACCGTCGGCGCCTGGGGTCTGGGCTGGG
AAGTCTGGTGCGACGGCATGGAGGTGTCGCAGTACACCTACTTCCAGCAGGTCGGCGGCCTGGACGTGAACCCGGTGGCG
GGCGAGCTGACCTATGGCCTGGAGCGCCTGGCCATGTACGTGTTCGGCGTCGACAACGTCTATGACCTGCCGTTCAACGA
CCCGGACTCGCCCCTGGGCGCGACGACCTATGGCGACGTGTTCCTCGAGAACGAGCGCCAGCAGTCGGAGGCCAATTTCC
ACGGCTTCGACGTGGCCGTGCTCAAGCAGCAGTTCGAGCAGATGGAAGAGCAGGTGCCGCTGATGCTGGCCCGCTCGTAC
CAGGACAAGGCCCTGGTGCTGCCCGCCTACGACATGGTCCTCAAGGCCAGCCACCTTTTCAACCTGATGAACGCCCGCGG
CGCGATCGCCGTCGCCGAGCGCGCCAGCTACATCGGCCGCATCCGCGACCTTTGTAAGATGTGCGCCAGCGCCTGGGTCG
AGCAGCAGGAAGCCGCGTAA

Upstream 100 bases:

>100_bases
CCCCGCGCCAAATAGGGCCTTTTCCGGCAAGGACATCGCTTGAAGCCCCCGGCGGCGAGCCCTATGGTCCGCCGACTTTT
TTCTAGGCCTGCTTCGATCG

Downstream 100 bases:

>100_bases
GTTAAGATGCCCCAACTTCTCCTCGAACTGTTCTCGGAAGAGATCCCCGCCCGCATGCAGGCCCAGGCCGCCAAGGACCT
GGAGCGCATGGCGCGCGAGC

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSREKPKSFQSLILTLHDYWSRQGCVILQPHDVEVGAGTLHPATVLRALGPKAWNAAYVQPSRRPGDGRYGENPNRLQHY
YQYQVILKPNPENMQDLYLGSLEAIGLDLRTHDIRFVEDDWENPTVGAWGLGWEVWCDGMEVSQYTYFQQVGGLDVNPVA
GELTYGLERLAMYVFGVDNVYDLPFNDPDSPLGATTYGDVFLENERQQSEANFHGFDVAVLKQQFEQMEEQVPLMLARSY
QDKALVLPAYDMVLKASHLFNLMNARGAIAVAERASYIGRIRDLCKMCASAWVEQQEAA

Sequences:

>Translated_299_residues
MSREKPKSFQSLILTLHDYWSRQGCVILQPHDVEVGAGTLHPATVLRALGPKAWNAAYVQPSRRPGDGRYGENPNRLQHY
YQYQVILKPNPENMQDLYLGSLEAIGLDLRTHDIRFVEDDWENPTVGAWGLGWEVWCDGMEVSQYTYFQQVGGLDVNPVA
GELTYGLERLAMYVFGVDNVYDLPFNDPDSPLGATTYGDVFLENERQQSEANFHGFDVAVLKQQFEQMEEQVPLMLARSY
QDKALVLPAYDMVLKASHLFNLMNARGAIAVAERASYIGRIRDLCKMCASAWVEQQEAA
>Mature_298_residues
SREKPKSFQSLILTLHDYWSRQGCVILQPHDVEVGAGTLHPATVLRALGPKAWNAAYVQPSRRPGDGRYGENPNRLQHYY
QYQVILKPNPENMQDLYLGSLEAIGLDLRTHDIRFVEDDWENPTVGAWGLGWEVWCDGMEVSQYTYFQQVGGLDVNPVAG
ELTYGLERLAMYVFGVDNVYDLPFNDPDSPLGATTYGDVFLENERQQSEANFHGFDVAVLKQQFEQMEEQVPLMLARSYQ
DKALVLPAYDMVLKASHLFNLMNARGAIAVAERASYIGRIRDLCKMCASAWVEQQEAA

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=298, Percent_Identity=63.0872483221477, Blast_Score=386, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_CAUCN (B8H516)

Other databases:

- EMBL:   CP001340
- RefSeq:   YP_002516776.1
- ProteinModelPortal:   B8H516
- SMR:   B8H516
- GeneID:   7330132
- GenomeReviews:   CP001340_GR
- KEGG:   ccs:CCNA_01403
- OMA:   CRRPTDG
- ProtClustDB:   PRK09348
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 33846; Mature: 33714

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSREKPKSFQSLILTLHDYWSRQGCVILQPHDVEVGAGTLHPATVLRALGPKAWNAAYVQ
CCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEC
PSRRPGDGRYGENPNRLQHYYQYQVILKPNPENMQDLYLGSLEAIGLDLRTHDIRFVEDD
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCHHHHEEEEEECCEEEEECC
WENPTVGAWGLGWEVWCDGMEVSQYTYFQQVGGLDVNPVAGELTYGLERLAMYVFGVDNV
CCCCCCCEECCCHHHEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
YDLPFNDPDSPLGATTYGDVFLENERQQSEANFHGFDVAVLKQQFEQMEEQVPLMLARSY
EECCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCC
QDKALVLPAYDMVLKASHLFNLMNARGAIAVAERASYIGRIRDLCKMCASAWVEQQEAA
CCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SREKPKSFQSLILTLHDYWSRQGCVILQPHDVEVGAGTLHPATVLRALGPKAWNAAYVQ
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEC
PSRRPGDGRYGENPNRLQHYYQYQVILKPNPENMQDLYLGSLEAIGLDLRTHDIRFVEDD
CCCCCCCCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCHHHHEEEEEECCEEEEECC
WENPTVGAWGLGWEVWCDGMEVSQYTYFQQVGGLDVNPVAGELTYGLERLAMYVFGVDNV
CCCCCCCEECCCHHHEECCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCE
YDLPFNDPDSPLGATTYGDVFLENERQQSEANFHGFDVAVLKQQFEQMEEQVPLMLARSY
EECCCCCCCCCCCCCCCCCEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHCC
QDKALVLPAYDMVLKASHLFNLMNARGAIAVAERASYIGRIRDLCKMCASAWVEQQEAA
CCCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA