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The map label for this gene is glyS

Identifier: 16125591

GI number: 16125591

Start: 1495864

End: 1497942

Strand: Direct

Name: glyS

Synonym: CC_1342

Alternate gene names: 16125591

Gene position: 1495864-1497942 (Clockwise)

Preceding gene: 16125590

Following gene: 16125594

Centisome position: 37.24

GC content: 66.96

Gene sequence:

>2079_bases
ATGCCCCAACTTCTCCTCGAACTGTTCTCGGAAGAGATCCCCGCCCGCATGCAGGCCCAGGCCGCCAAGGACCTGGAGCG
CATGGCGCGCGAGCACCTGGCCGCCGCCGGCTTCCTGCCCGAGGCGCTGAAGACCTTCGCCGGCCCGCGCCGCCTGACCC
TGGTGGCCGAAGGCCTGCCGCTGGCCCAGGCCGACCGCAAGGAAGAGCTGAAAGGCCCCCGCGTCGGCGCGCCGCCGCAA
GCCATGGAAGGCTTCCTGCGCAAGGCGGGCCTGACGCAAGACCAGCTGGTCGAGCGCGACGGCGTCTACATGGCCTTCAT
CGAAAAGAAGGGCCGTCCGACCGCCGAAATCATCGCCGAGATGGTCGAGGCCATCGTGCGCGGCTTCCCCTGGCCCAAGT
CGATGATCTGGGGGACCAAGAAGCTGCGCTGGGTGCGGCCGCTCAAGCGCATCCTGTGCGTGCTCGACCGCGAGGTCGTG
CCGTTCGCGATCGAGGGCATCGAGAGCGGCGACGTCACCGAAGGCCACCGCTTCATGGGCGAGGCCAAGCCGTTCGTGGC
CAAGGACTTCGACGAGTATGTCGCGGGCCTGGAAAAGCACTTCGTCGTGCTCGACGTCGAGGAGCGGAAAGCCCGCATCC
TGGAAGGCTGCAAGACCCTGTGCTTTGCGCGTCACTTGGAACTGGTCGAGGACCAGGGCCTGCTGGACGAAGTCGCGGGC
CTGGCCGAATGGCCGACCCCGGTGCTGGGCGACATGGACCCGGTGTTCCTCAGCCTGCCGCCCGAGGTGATCCGCACCTC
GATGCGCACGCACCAGAAGTACTTCGCGGTCCGCAAGGCCGGGGAAGAGGGCCTGGCCCCGCACTTCATCACCATCGCCA
ACATCCAGCCGGCCGACGGCGGCGCGGTGATCGCGGCCGGCAACGCCAAGGTGCTGTCCTCGCGCCTGTCCGACGCCCGC
TTCTTCTGGGACGAGGACGTCAAGGTCGGCTTCGAGCCGTGGCTCAAGAAGCTGGACGGCGTGACCTTCCACGCCAAGCT
CGGGACGATGGCCCAGCGCGTCGAGCGCATCGTCGCCCTGGCGGCCGAGATCGCCCCGCTGGTTGGCGCGGATGTCGAGA
AGACCAAGGAAGCCGCGCGCCTGGCCAAGGCGGACCTCGCCTCGCAGATGGTCGGCGAGTTCCCCGAACTGCAGGGGATC
ATGGGTGGCTACTACGCCCGCACCTTCGGCCTGGACCATGAGATCGCCGACGCCGTGCGCGATCACTACAAGCCCCAGGG
GCCATCGGATGCAGTGCCGACCGCGCCGGTCAGCATCGCCGTGGCGCTGGCGGACAAGCTGGACACGCTCGCGAGTTTCT
TCGCGATCGAGGAAAAGCCGACGGGTAGCAAAGATCCTTATGCCCTTCGTCGCGCCGCGCTCGGCGCTATTAGGATCATC
TTGGAAAACAATCGAAAGATTGGCTTCCGGATGTTCTTCGTTCCCTATCTTGATCGCATGCAAGCCGAATGGCGAGCTGG
CGTTGTTACCTCTCCTCGTCTGAACGCGGACTGGCTCTCTATCTCAACCGAGTTGCTCGCCTTCTTCGCCGACCGCCTGA
AGGTCACCCTCCGCGACCAAGGCAAGCGTCACGACCTCGTCGACGCCGTGTTCGCCCTGGGCGATGACGACCTGGCTCGT
ATCGTAGCCCGCGTCGAGGCCCTGGACGGCTTCCTGAAGACCGACGACGGCAAGAACCTGCTGGCCGGCTACAAGCGCGC
CTCCAACATCCTCAAGGCCGAGGAGAAGAAGGGCGCTCTGCCGACCGGCGCGCCCGCCGAGCCGGCCGCCGACAGCGCCG
CCGAGGTGGGCCTCTACAACGCCCTGCGTCTGCTGGACAAACCGCTGAAGGACGCTCTGGCCAAGGAAGACTTCACCGGC
GCCATGACCCAGCTGGCCGAACTGCGCGGCCCGGTCGACGCCTATCTCGACGGCGTCTTCGTCAACGAGCCCGAACACCG
CGACAACCGCCTGCGCACGCTGGCGACGGTGCGCGATGCCATGGGCCAGGTGGCGGATTTTGGGCTGATCGGGGGGTAG

Upstream 100 bases:

>100_bases
CGCCGTCGCCGAGCGCGCCAGCTACATCGGCCGCATCCGCGACCTTTGTAAGATGTGCGCCAGCGCCTGGGTCGAGCAGC
AGGAAGCCGCGTAAGTTAAG

Downstream 100 bases:

>100_bases
GGAAAACCTCCCCCCATACAAAACCCGTCATCCCGCGCTTTATGCGCGGGATCCATGGTTCAGCTTCCACGTGAGAGCGT
ACGTGTTCCTCGCACCTGCG

Product: glycyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Glycine--tRNA ligase beta subunit; GlyRS [H]

Number of amino acids: Translated: 692; Mature: 691

Protein sequence:

>692_residues
MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLPLAQADRKEELKGPRVGAPPQ
AMEGFLRKAGLTQDQLVERDGVYMAFIEKKGRPTAEIIAEMVEAIVRGFPWPKSMIWGTKKLRWVRPLKRILCVLDREVV
PFAIEGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFARHLELVEDQGLLDEVAG
LAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEGLAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDAR
FFWDEDVKVGFEPWLKKLDGVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLAKADLASQMVGEFPELQGI
MGGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVALADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRII
LENNRKIGFRMFFVPYLDRMQAEWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLAR
IVARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNALRLLDKPLKDALAKEDFTG
AMTQLAELRGPVDAYLDGVFVNEPEHRDNRLRTLATVRDAMGQVADFGLIGG

Sequences:

>Translated_692_residues
MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLPLAQADRKEELKGPRVGAPPQ
AMEGFLRKAGLTQDQLVERDGVYMAFIEKKGRPTAEIIAEMVEAIVRGFPWPKSMIWGTKKLRWVRPLKRILCVLDREVV
PFAIEGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFARHLELVEDQGLLDEVAG
LAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEGLAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDAR
FFWDEDVKVGFEPWLKKLDGVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLAKADLASQMVGEFPELQGI
MGGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVALADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRII
LENNRKIGFRMFFVPYLDRMQAEWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLAR
IVARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNALRLLDKPLKDALAKEDFTG
AMTQLAELRGPVDAYLDGVFVNEPEHRDNRLRTLATVRDAMGQVADFGLIGG
>Mature_691_residues
PQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLPLAQADRKEELKGPRVGAPPQA
MEGFLRKAGLTQDQLVERDGVYMAFIEKKGRPTAEIIAEMVEAIVRGFPWPKSMIWGTKKLRWVRPLKRILCVLDREVVP
FAIEGIESGDVTEGHRFMGEAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFARHLELVEDQGLLDEVAGL
AEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEGLAPHFITIANIQPADGGAVIAAGNAKVLSSRLSDARF
FWDEDVKVGFEPWLKKLDGVTFHAKLGTMAQRVERIVALAAEIAPLVGADVEKTKEAARLAKADLASQMVGEFPELQGIM
GGYYARTFGLDHEIADAVRDHYKPQGPSDAVPTAPVSIAVALADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRIIL
ENNRKIGFRMFFVPYLDRMQAEWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQGKRHDLVDAVFALGDDDLARI
VARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGALPTGAPAEPAADSAAEVGLYNALRLLDKPLKDALAKEDFTGA
MTQLAELRGPVDAYLDGVFVNEPEHRDNRLRTLATVRDAMGQVADFGLIGG

Specific function: Unknown

COG id: COG0751

COG function: function code J; Glycyl-tRNA synthetase, beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789982, Length=708, Percent_Identity=35.5932203389831, Blast_Score=353, Evalue=2e-98,

Paralogues:

None

Copy number: 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 400 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008909
- InterPro:   IPR006194
- InterPro:   IPR015944
- InterPro:   IPR002311 [H]

Pfam domain/function: PF05746 DALR_1; PF02092 tRNA_synt_2f [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 76062; Mature: 75930

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLP
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCC
LAQADRKEELKGPRVGAPPQAMEGFLRKAGLTQDQLVERDGVYMAFIEKKGRPTAEIIAE
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHH
MVEAIVRGFPWPKSMIWGTKKLRWVRPLKRILCVLDREVVPFAIEGIESGDVTEGHRFMG
HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHC
EAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFARHLELVEDQGLLDEVAG
CCCCHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEGLAPHFITIANIQPADG
HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
GAVIAAGNAKVLSSRLSDARFFWDEDVKVGFEPWLKKLDGVTFHAKLGTMAQRVERIVAL
CEEEEECCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH
AAEIAPLVGADVEKTKEAARLAKADLASQMVGEFPELQGIMGGYYARTFGLDHEIADAVR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
DHYKPQGPSDAVPTAPVSIAVALADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRII
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEE
LENNRKIGFRMFFVPYLDRMQAEWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQ
EECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHCC
GKRHDLVDAVFALGDDDLARIVARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGAL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PTGAPAEPAADSAAEVGLYNALRLLDKPLKDALAKEDFTGAMTQLAELRGPVDAYLDGVF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEE
VNEPEHRDNRLRTLATVRDAMGQVADFGLIGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PQLLLELFSEEIPARMQAQAAKDLERMAREHLAAAGFLPEALKTFAGPRRLTLVAEGLP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCC
LAQADRKEELKGPRVGAPPQAMEGFLRKAGLTQDQLVERDGVYMAFIEKKGRPTAEIIAE
CCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHH
MVEAIVRGFPWPKSMIWGTKKLRWVRPLKRILCVLDREVVPFAIEGIESGDVTEGHRFMG
HHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHC
EAKPFVAKDFDEYVAGLEKHFVVLDVEERKARILEGCKTLCFARHLELVEDQGLLDEVAG
CCCCHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LAEWPTPVLGDMDPVFLSLPPEVIRTSMRTHQKYFAVRKAGEEGLAPHFITIANIQPADG
HHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC
GAVIAAGNAKVLSSRLSDARFFWDEDVKVGFEPWLKKLDGVTFHAKLGTMAQRVERIVAL
CEEEEECCHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCEEEHHHHHHHHHHHHHHHH
AAEIAPLVGADVEKTKEAARLAKADLASQMVGEFPELQGIMGGYYARTFGLDHEIADAVR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHH
DHYKPQGPSDAVPTAPVSIAVALADKLDTLASFFAIEEKPTGSKDPYALRRAALGAIRII
HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEE
LENNRKIGFRMFFVPYLDRMQAEWRAGVVTSPRLNADWLSISTELLAFFADRLKVTLRDQ
EECCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHCC
GKRHDLVDAVFALGDDDLARIVARVEALDGFLKTDDGKNLLAGYKRASNILKAEEKKGAL
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PTGAPAEPAADSAAEVGLYNALRLLDKPLKDALAKEDFTGAMTQLAELRGPVDAYLDGVF
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEE
VNEPEHRDNRLRTLATVRDAMGQVADFGLIGG
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA