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The map label for this gene is 16124286

Identifier: 16124286

GI number: 16124286

Start: 33595

End: 34329

Strand: Direct

Name: 16124286

Synonym: CC_0030

Alternate gene names: NA

Gene position: 33595-34329 (Clockwise)

Preceding gene: 16124285

Following gene: 16124303

Centisome position: 0.84

GC content: 68.84

Gene sequence:

>735_bases
TTGGAGTCGCCGATGAAGACCGTCCCCGCCGCCATCCTGGCCGCCGCCCTGGCCCTTACGGCCGCCGCCGCGGAGGCCTC
CAGCCTGCAGGCCTGCGCCGTGCCCAAGGCGGTCACGCCCGCGCCGACCGAGATCCCGCCGCCCGACGAGATCCATCCTA
ACGTGCCGATCGCGGCCTATCTCTTGGCCCTCTACTGGTCGCCTGAGGCCTGCCGCGCCGGTATCCCGGAGTCCGACAAG
GCGATCCAGTGCGAGGCCAATCGCTTCGGCTTCACGGTGCATGGCCTGTGGCCCAACGGGCCTGATCGGGTGCATCCGCG
CTATTGCCGCTCAAGCCCGCCGATGCGGGTGAAGACGGTGAAGGCCAATCTGTGCATGACCCCGTCGCCCTGGCTGCTGC
AGCACGAGTGGCAGGCGCACGGGACCTGCAACTGGAAAACGCCTGAGGCCTATTTCAAGAAGACCCGCCAGATCCGCGAG
CGGCTGGACGTTCCCGATCTCGATCCCGGCGCTGACGGGACCATGACCGCCGGCGAGATCCGTCAGGCCTTCATCGCCCG
CAATCCGGGCGTGCCCGCCCAGGGCCTGAACGTCCGGATCAAGCAGGGCCGCTTGACCGAGGTCTGGGTGTGCATGGACC
TGAAGTTCAAGTGGGCGGCCTGCCGGGGCGGCAATGGACCGGCGGATGCTGTGGTGGCGGCGGTGACGCCTCGAGCCTCA
CCAGGCCAGCAGTGA

Upstream 100 bases:

>100_bases
CACGGTGCTCGGCGGACTGGCGGTGCGGATGGCCACCGAGGCGCGGCGCTGATCGCGGGCTTGACGCCCTGGCGAGCGCG
CGGGCCTATCGGTCGGGTTC

Downstream 100 bases:

>100_bases
CAGGCCGGGAATATCTCTGAAGTCGTCGGCGTTGAACGTCACAAACGTCGCCCGATGGGCCAGCGCCTGGGCGGCGATCA
TGCGATCGACGACCTTGCGC

Product: ribonuclease T2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MESPMKTVPAAILAAALALTAAAAEASSLQACAVPKAVTPAPTEIPPPDEIHPNVPIAAYLLALYWSPEACRAGIPESDK
AIQCEANRFGFTVHGLWPNGPDRVHPRYCRSSPPMRVKTVKANLCMTPSPWLLQHEWQAHGTCNWKTPEAYFKKTRQIRE
RLDVPDLDPGADGTMTAGEIRQAFIARNPGVPAQGLNVRIKQGRLTEVWVCMDLKFKWAACRGGNGPADAVVAAVTPRAS
PGQQ

Sequences:

>Translated_244_residues
MESPMKTVPAAILAAALALTAAAAEASSLQACAVPKAVTPAPTEIPPPDEIHPNVPIAAYLLALYWSPEACRAGIPESDK
AIQCEANRFGFTVHGLWPNGPDRVHPRYCRSSPPMRVKTVKANLCMTPSPWLLQHEWQAHGTCNWKTPEAYFKKTRQIRE
RLDVPDLDPGADGTMTAGEIRQAFIARNPGVPAQGLNVRIKQGRLTEVWVCMDLKFKWAACRGGNGPADAVVAAVTPRAS
PGQQ
>Mature_244_residues
MESPMKTVPAAILAAALALTAAAAEASSLQACAVPKAVTPAPTEIPPPDEIHPNVPIAAYLLALYWSPEACRAGIPESDK
AIQCEANRFGFTVHGLWPNGPDRVHPRYCRSSPPMRVKTVKANLCMTPSPWLLQHEWQAHGTCNWKTPEAYFKKTRQIRE
RLDVPDLDPGADGTMTAGEIRQAFIARNPGVPAQGLNVRIKQGRLTEVWVCMDLKFKWAACRGGNGPADAVVAAVTPRAS
PGQQ

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNase T2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001568
- InterPro:   IPR018188 [H]

Pfam domain/function: PF00445 Ribonuclease_T2 [H]

EC number: NA

Molecular weight: Translated: 26376; Mature: 26376

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00530 RNASE_T2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPMKTVPAAILAAALALTAAAAEASSLQACAVPKAVTPAPTEIPPPDEIHPNVPIAAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LLALYWSPEACRAGIPESDKAIQCEANRFGFTVHGLWPNGPDRVHPRYCRSSPPMRVKTV
HHHHHCCCHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHCCCCCCEEEEE
KANLCMTPSPWLLQHEWQAHGTCNWKTPEAYFKKTRQIRERLDVPDLDPGADGTMTAGEI
EECEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RQAFIARNPGVPAQGLNVRIKQGRLTEVWVCMDLKFKWAACRGGNGPADAVVAAVTPRAS
HHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECEEEEEEECCCCCCHHHEEEEECCCCC
PGQQ
CCCC
>Mature Secondary Structure
MESPMKTVPAAILAAALALTAAAAEASSLQACAVPKAVTPAPTEIPPPDEIHPNVPIAAY
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LLALYWSPEACRAGIPESDKAIQCEANRFGFTVHGLWPNGPDRVHPRYCRSSPPMRVKTV
HHHHHCCCHHHHCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHCCCCCCEEEEE
KANLCMTPSPWLLQHEWQAHGTCNWKTPEAYFKKTRQIRERLDVPDLDPGADGTMTAGEI
EECEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RQAFIARNPGVPAQGLNVRIKQGRLTEVWVCMDLKFKWAACRGGNGPADAVVAAVTPRAS
HHHHHHCCCCCCCCCCEEEEECCCCEEEEEEEECEEEEEEECCCCCCHHHEEEEECCCCC
PGQQ
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]