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The map label for this gene is 13476407

Identifier: 13476407

GI number: 13476407

Start: 6392370

End: 6392636

Strand: Direct

Name: 13476407

Synonym: msr7720

Alternate gene names: NA

Gene position: 6392370-6392636 (Clockwise)

Preceding gene: 13476401

Following gene: 13476408

Centisome position: 90.85

GC content: 61.42

Gene sequence:

>267_bases
ATGGCACGTTTTGAAATGCTTGAAGCAGGTTTCGGCGCCATGGGGGCAACTGCCCAGGCCGACATTCTTTTCGAACTGGG
CATGATGTATGCGACCGGCCGCGATTGCGAGACCGACGTCGTTGCCGCCCACAAATGGTTCAACATCGCCGCCATCAAGG
GCTCGGCCCGCGCCGCGGAACTGCGCTCGGAACTGTCGGCCGCCATGTCGAAGGTCGAGATCGCCAAGGCGCTGCGCGAA
GCCCGCGAATGGATGACCATGCACTAA

Upstream 100 bases:

>100_bases
ACGACGGATTCAAGCCTGATCGGCATTCTCGAAAGCATCGAAAGAGCGGCCCGGACAAGACGAACGGAGGCAGCTCTCGG
GAGCCAGACAGGGGACTAAA

Downstream 100 bases:

>100_bases
AGTTCCGGCAGACGGGGACGCTCCGGCCAAGACCGCTTCAAGACGGTCGGGCCAAACAGGGATAAGGCTGCGCAGACAGC
CAGGCCACAGGCTATCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Sel1 Domain Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MARFEMLEAGFGAMGATAQADILFELGMMYATGRDCETDVVAAHKWFNIAAIKGSARAAELRSELSAAMSKVEIAKALRE
AREWMTMH

Sequences:

>Translated_88_residues
MARFEMLEAGFGAMGATAQADILFELGMMYATGRDCETDVVAAHKWFNIAAIKGSARAAELRSELSAAMSKVEIAKALRE
AREWMTMH
>Mature_87_residues
ARFEMLEAGFGAMGATAQADILFELGMMYATGRDCETDVVAAHKWFNIAAIKGSARAAELRSELSAAMSKVEIAKALREA
REWMTMH

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9643; Mature: 9512

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
9.1 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARFEMLEAGFGAMGATAQADILFELGMMYATGRDCETDVVAAHKWFNIAAIKGSARAAE
CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCHHHHH
LRSELSAAMSKVEIAKALREAREWMTMH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARFEMLEAGFGAMGATAQADILFELGMMYATGRDCETDVVAAHKWFNIAAIKGSARAAE
CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCHHHHH
LRSELSAAMSKVEIAKALREAREWMTMH
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA