| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476401
Identifier: 13476401
GI number: 13476401
Start: 6387617
End: 6388213
Strand: Direct
Name: 13476401
Synonym: mlr7711
Alternate gene names: NA
Gene position: 6387617-6388213 (Clockwise)
Preceding gene: 13476400
Following gene: 13476407
Centisome position: 90.78
GC content: 62.98
Gene sequence:
>597_bases ATGCGCCGGACAGTTCTGACATGCCTCGTCGCCATCGGGGCGCTGTTTGCGCCACAGGCCTCAGCCGGCACCAGGGCAGT GATCCAGACGCTGACCTACGACGTCACGGGAAGCTCGGGCGCCGCCCTCGTCGACGCGATGGACAGAAAAGGCCCCCGGC ACGGCTTCATGACGCATGCCATCGCCACAACCGCCTATACCGTCGACTGGGACCTCGACGCCGGCCAGGGCAACGGCTTC TGCCGGATACGTGGGGTCAATGGCACGCTCAATCTTTCCTACACCTTCCCGCACCTTGCCCCGCCCGCCACGCCGGCGCT GAAGAGGCGCTGGAACAGGTTTTTCGCAGGTGTTCGCGCCCATGAGGAAACACATGGGCGCATTGCCAGGGAGATGATGC GCGCTACGGAAAAGTCGATAACCGGCTTGCGGATCGCCAACGATCCGTCCTGCTACAAGGCGCGCCGCGAAGCTCAGCTT CGCATCCGGGCCGTCTATGCCGAATATGAGGCCAAACAAATCGCCTTCGATCGGCGCGAACACAGCAGTGGCGGCCATGT CGAACATCTGATCGCTGCCTTGACCGGAAAACCATGA
Upstream 100 bases:
>100_bases AAAATGCAGGTAGGGCTGGCCGCGAGGGCATGCAGGCCAGCAGAAACGTTGAAACGGCCACCGGTCTATGGTTCCTTCTC TGGAGATAGGGAGAAGGCCG
Downstream 100 bases:
>100_bases ACCGAGTGATCCGGTCAGCGCCGTGGCGCGCGAGCTTCGCTCAGCCGCGCGGCTTGGCCGACAAGTCGCTCGCCGCGAGC GCTGTGGCGTGGCCATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP
Sequences:
>Translated_198_residues MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP >Mature_198_residues MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHAIATTAYTVDWDLDAGQGNGF CRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRAHEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQL RIRAVYAEYEAKQIAFDRREHSSGGHVEHLIAALTGKP
Specific function: Unknown
COG id: COG5664
COG function: function code O; Predicted secreted Zn-dependent protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21736; Mature: 21736
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHA CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCHHHHH IATTAYTVDWDLDAGQGNGFCRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRA HHHEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH HEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQLRIRAVYAEYEAKQIAFDRRE CHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHC HSSGGHVEHLIAALTGKP CCCCCHHHHHHHHHCCCC >Mature Secondary Structure MRRTVLTCLVAIGALFAPQASAGTRAVIQTLTYDVTGSSGAALVDAMDRKGPRHGFMTHA CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHCCCCCCCHHHHH IATTAYTVDWDLDAGQGNGFCRIRGVNGTLNLSYTFPHLAPPATPALKRRWNRFFAGVRA HHHEEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH HEETHGRIAREMMRATEKSITGLRIANDPSCYKARREAQLRIRAVYAEYEAKQIAFDRRE CHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHC HSSGGHVEHLIAALTGKP CCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA