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The map label for this gene is omp [H]

Identifier: 13476383

GI number: 13476383

Start: 6362264

End: 6362863

Strand: Direct

Name: omp [H]

Synonym: mlr7687

Alternate gene names: 13476383

Gene position: 6362264-6362863 (Clockwise)

Preceding gene: 13476382

Following gene: 13476384

Centisome position: 90.42

GC content: 63.67

Gene sequence:

>600_bases
GTGCAAGGCGTATGTTATGGCGGCATATCGATTGATTTTGAGCTGGCCGGCAGCGGCCAAATTTCCGACAAATATCAATA
CTATGGCCACGCCTACTTCTCCGATGACGCGGCCCCCGGCGCATCCATGGCAGGCTCCAACTCAAGAAAACCGGTTGTTG
GCATGAAGATTCGCGTCGCGCTTGTTTCCGCATTGCTGGCCGTCTCCGGCTGCACCACCTTGAGCGGCAAGGCCCCCACG
CTCGCGCCGACACCGGCGTCGACGCCTCCGACAAGCGGCAAGGTCACCAAGTCGATCATTTCGGCGATGGACGGCGGCCT
CATCGGCGGCTCGATCGGCAACGGCCTTAGCGACGAAGAGAAGCGCAGCGCGCTCGAGGCCGAATACAAGGCGCTCGAAT
ACACGACGAGCGGTCAGAAGGTGGCGTGGAAGGGCGATCAGGCTTCGCACTATGGCGAGGTGGTTCCGGCCCAGCCCTAT
CGCGTCGGCTCGCAGGACTGCCGCCAGTATACGCAGACCGTGTTCACCGGCGGCGCCGGGGTGACGGCGCGCGGAACCGC
TTGCCGCAATGCCGACGGCAGCTGGACGCCGCTGACCTGA

Upstream 100 bases:

>100_bases
TGGAGGCATTCTCGCGCTCGAACGGTCCGGCCTGGGTGGATTGAAGGCAGTCGTGCGCTTGCGGAGCCTTCAGTGACGCT
TAACTGGCCAATCGACAGCG

Downstream 100 bases:

>100_bases
CTGCTCGCATGTCGCCCAAAAGTGCGCAGCGGTTTTGGGACAACGACATGCACAAAACAAAGACCGGACCGGCTCCGGTT
GGAATCCGGTCCGGTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQGVCYGGISIDFELAGSGQISDKYQYYGHAYFSDDAAPGASMAGSNSRKPVVGMKIRVALVSALLAVSGCTTLSGKAPT
LAPTPASTPPTSGKVTKSIISAMDGGLIGGSIGNGLSDEEKRSALEAEYKALEYTTSGQKVAWKGDQASHYGEVVPAQPY
RVGSQDCRQYTQTVFTGGAGVTARGTACRNADGSWTPLT

Sequences:

>Translated_199_residues
MQGVCYGGISIDFELAGSGQISDKYQYYGHAYFSDDAAPGASMAGSNSRKPVVGMKIRVALVSALLAVSGCTTLSGKAPT
LAPTPASTPPTSGKVTKSIISAMDGGLIGGSIGNGLSDEEKRSALEAEYKALEYTTSGQKVAWKGDQASHYGEVVPAQPY
RVGSQDCRQYTQTVFTGGAGVTARGTACRNADGSWTPLT
>Mature_199_residues
MQGVCYGGISIDFELAGSGQISDKYQYYGHAYFSDDAAPGASMAGSNSRKPVVGMKIRVALVSALLAVSGCTTLSGKAPT
LAPTPASTPPTSGKVTKSIISAMDGGLIGGSIGNGLSDEEKRSALEAEYKALEYTTSGQKVAWKGDQASHYGEVVPAQPY
RVGSQDCRQYTQTVFTGGAGVTARGTACRNADGSWTPLT

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rickettsiale 17 kDa surface antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816
- InterPro:   IPR016364 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 20517; Mature: 20517

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGVCYGGISIDFELAGSGQISDKYQYYGHAYFSDDAAPGASMAGSNSRKPVVGMKIRVA
CCCEEECCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHH
LVSALLAVSGCTTLSGKAPTLAPTPASTPPTSGKVTKSIISAMDGGLIGGSIGNGLSDEE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHH
KRSALEAEYKALEYTTSGQKVAWKGDQASHYGEVVPAQPYRVGSQDCRQYTQTVFTGGAG
HHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
VTARGTACRNADGSWTPLT
CEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGVCYGGISIDFELAGSGQISDKYQYYGHAYFSDDAAPGASMAGSNSRKPVVGMKIRVA
CCCEEECCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCEECHHHHHH
LVSALLAVSGCTTLSGKAPTLAPTPASTPPTSGKVTKSIISAMDGGLIGGSIGNGLSDEE
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCHH
KRSALEAEYKALEYTTSGQKVAWKGDQASHYGEVVPAQPYRVGSQDCRQYTQTVFTGGAG
HHHHHHHHHHHEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
VTARGTACRNADGSWTPLT
CEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2768201; 11557893 [H]