| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476379
Identifier: 13476379
GI number: 13476379
Start: 6359040
End: 6359609
Strand: Reverse
Name: 13476379
Synonym: mll7682
Alternate gene names: NA
Gene position: 6359609-6359040 (Counterclockwise)
Preceding gene: 13476392
Following gene: 13476372
Centisome position: 90.39
GC content: 59.12
Gene sequence:
>570_bases GTGTCAGGCATTTTCCTGCGTCAGCGCGCGAAACCGCAGCAGCCCGTGATGCACGAGGAGATCTTCGTCGTAGCGGGCCT CGGTGAATTCAAGCGACAGCCGCGTCTTGCCGCGCCGGCCGACCACCAGTGCGGCGTTGGCAAGGCGGGCCTTGATGGCG GCCATGATGGCAAGGGTTTCGTCTTCACCATGGGCTTTCGACCAGATATGCAGCGTAATCAACTGATCGTCGTCGTTCTC GGCGCCGGTGTCCCAATCAAAGGCGCTGGTCTGACCAAAAGTCACGTAGGGAAAAGCGGCATTTTCCGTCGCCCGCTCCA GCAGTCCGGCGCCACCAAGCAGCGCAGACAGCGACTTATCGCTTTTGAGCCTCAGAAAAAGTGCCTGCAGCAAATCGCCG GGCGCGGTCATTTGTCGTCCCCCTCGCCTGTCATGCCTTGTGCAAGCGGTTCGTCATACTCGCAAATTCACGCGCAGCGT AGCCGGCTCGTCAAGTCTGCGCCATATCGCGTGATTCGTCTCGGCGTGATCATGAACGCCGATCATCTCGAAAATACGAC TCTGTTATGA
Upstream 100 bases:
>100_bases CACCCGTGAAACGCGAGACGACCGATGGTGATTTCGACGCCCCGACCCGACGAAGTCCCGCAGACGCCAGTCTAGACTCT GTTTCGGCCGGATTGAAAGC
Downstream 100 bases:
>100_bases ACAGATTGCCATGCCGAGCAACCTTGGAGAGCCGATCTGCTCGGCCGGCATGGTTCCCGGGGACACTTTGATTTCCGCAG TCTCTGTCAGTATCGGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSGIFLRQRAKPQQPVMHEEIFVVAGLGEFKRQPRLAAPADHQCGVGKAGLDGGHDGKGFVFTMGFRPDMQRNQLIVVVL GAGVPIKGAGLTKSHVGKSGIFRRPLQQSGATKQRRQRLIAFEPQKKCLQQIAGRGHLSSPSPVMPCASGSSYSQIHAQR SRLVKSAPYRVIRLGVIMNADHLENTTLL
Sequences:
>Translated_189_residues MSGIFLRQRAKPQQPVMHEEIFVVAGLGEFKRQPRLAAPADHQCGVGKAGLDGGHDGKGFVFTMGFRPDMQRNQLIVVVL GAGVPIKGAGLTKSHVGKSGIFRRPLQQSGATKQRRQRLIAFEPQKKCLQQIAGRGHLSSPSPVMPCASGSSYSQIHAQR SRLVKSAPYRVIRLGVIMNADHLENTTLL >Mature_188_residues SGIFLRQRAKPQQPVMHEEIFVVAGLGEFKRQPRLAAPADHQCGVGKAGLDGGHDGKGFVFTMGFRPDMQRNQLIVVVLG AGVPIKGAGLTKSHVGKSGIFRRPLQQSGATKQRRQRLIAFEPQKKCLQQIAGRGHLSSPSPVMPCASGSSYSQIHAQRS RLVKSAPYRVIRLGVIMNADHLENTTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20555; Mature: 20424
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIFLRQRAKPQQPVMHEEIFVVAGLGEFKRQPRLAAPADHQCGVGKAGLDGGHDGKGF CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VFTMGFRPDMQRNQLIVVVLGAGVPIKGAGLTKSHVGKSGIFRRPLQQSGATKQRRQRLI EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCHHHCCHHHCCCCHHHHHCCC AFEPQKKCLQQIAGRGHLSSPSPVMPCASGSSYSQIHAQRSRLVKSAPYRVIRLGVIMNA EECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECC DHLENTTLL CCCCCCCCC >Mature Secondary Structure SGIFLRQRAKPQQPVMHEEIFVVAGLGEFKRQPRLAAPADHQCGVGKAGLDGGHDGKGF CCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VFTMGFRPDMQRNQLIVVVLGAGVPIKGAGLTKSHVGKSGIFRRPLQQSGATKQRRQRLI EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHCCCCCHHHCCHHHCCCCHHHHHCCC AFEPQKKCLQQIAGRGHLSSPSPVMPCASGSSYSQIHAQRSRLVKSAPYRVIRLGVIMNA EECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECC DHLENTTLL CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA