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The map label for this gene is abgB [H]

Identifier: 13476372

GI number: 13476372

Start: 6351505

End: 6353109

Strand: Reverse

Name: abgB [H]

Synonym: mll7671

Alternate gene names: 13476372

Gene position: 6353109-6351505 (Counterclockwise)

Preceding gene: 13476379

Following gene: 13476371

Centisome position: 90.29

GC content: 66.73

Gene sequence:

>1605_bases
ATGGACAAACCGGTGACGACATCGGCGCAAGAGACCGCCCTTGCCTGCCTCGACGGCATCCAGCCGCTGCTGTCGGCGTG
GACGCGCACCATCTTCGATTTCGGCGAGACCGCCTGGCGCGAATATCAGTCCGCCGCGTGGTATGTGGAGCGACTGAAGC
GGGAAGGCTTTACCGTCGAGGAAGGTTCCGGCGGCATGCCGACCGCCTTCTGCGCCCACTGGACGAATGGCGCCGGACCG
ACGATCGGCCTGTATGCCGAGTATGATGCCGTGCCCGGCAACTGCCAGGACGCGGTGACGGTGAAGCAGCCGCGGCCCGG
CCTTGGCGTCGAGGCCGGCGGCCACACCGATCCGCATTCGGGGTTGGGCATGGCAAGCCTCGGCGGCCTGCTGGCCACCA
AGGCGGCGATGCAGCACCACGGCATTCCAGGCACGTTGCGCTTTACCGGCGAACCGGCCGAAAAGGTGCGCGGCTCGAAG
CCGATCCATGCAGCGAAGGGCTATTATGACGGCCTTGCCGGCATGATCTCCTTCCACCCGTTCTACATGCTGCCGCTCTG
CAACACCGCGCGCTGGGACACGCATTGCGGCGCCGCCTACGCCATGATCTACCGCTTTGTTTGCGACGAACCCGAGAACT
GGGTTCGTGCAGGCGATGGCGCACCGATCCCGCAGGCGCATTCGGCGGTCCGCGCGCCCGGCGCCAACGACGCGCTGATG
ACGATGTACATGGCGTCCAAGGCGCTGCGCGATTCCATGCTGCCGCATCAGGGCGGCTGGTCGATCAGCGAGGCGATCCT
GACGGCGGGCCAGGCCACCGCCGACAATCTGCCGGCGGGGCTGGCCGAGATCCAGTACATGATCCGCGTGCCGACGCTTC
GTATGGCCGAGCAGGTCACCGCCGTGCTTGAGCGCAATGCGGCAGCGGCGGCGGCGATCAGCGGCTGCCGTTATGAGCGC
CACTGGGTGTCGAAATCACGGCCCGGGCTGGCCAATCACGCCATGGCCGAGATCGCCTATGAAGCGCTGTCGACGGTCGG
GCCGCCCCGCTGGGACGAGGCCGCCAGGGCGATCGGGCGCGAAATCCAGGTCAATGCCGGTGGCACCGCGACCGAGAACC
CGTTCATTGACGAACTGGAGCGGCTGATCGCACCAAAGGAAGCGGAAGCGATCCTGCGCCGCGACCTGCCGCCCTCGCAG
GTGAATTCGACCTCCGACGACTATACCGACATGAGCTGGCACGCACCGACCGCGCGCTTTTACGTCGCCCGTCCGGCGCT
GCGTTCGGCAGATGGCCATGCCTATCCTTCCTGGGTGATGAATGCGCTGGGCGGCATTTCCGCCACCATCGACCCGATGG
TCACCTGCGCTGCCAAGACCGTTGCGCTGGCGGCGCTGCGCCTACTCGAAGACAAGACCGCTCGCGATACGGCGATGGAC
GAGTTCGTCACCCGCACCGGCGGCGGCATTGGCGGCACGAACTGGATCGCGCCACTCTGCGACTACGAACCGCCGATCAA
CTTCCGCTGGCCGGAATATGTCACCACCGCGCGCGGCCGCGACTGGTGGATCCCAAGCCATGCATGGCCCCCGACCAACT
CTTGA

Upstream 100 bases:

>100_bases
GCGCCTGTGTGGATGGAATTCTCAAGAGGTGAACCGAATTTGCATGAACCGGGAAAACATATCACTTTTTGGCGAGCCGC
TTCACTGCTTTCTTTGATGC

Downstream 100 bases:

>100_bases
GAGCAAGCCCACGAGGAGAACCGCATGACCGTTCATGATCGCATCGTCGCCGAGCCGTTTTCGCTGCAGCGCCGCAATCC
GGCCGGCGGCACCAAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MDKPVTTSAQETALACLDGIQPLLSAWTRTIFDFGETAWREYQSAAWYVERLKREGFTVEEGSGGMPTAFCAHWTNGAGP
TIGLYAEYDAVPGNCQDAVTVKQPRPGLGVEAGGHTDPHSGLGMASLGGLLATKAAMQHHGIPGTLRFTGEPAEKVRGSK
PIHAAKGYYDGLAGMISFHPFYMLPLCNTARWDTHCGAAYAMIYRFVCDEPENWVRAGDGAPIPQAHSAVRAPGANDALM
TMYMASKALRDSMLPHQGGWSISEAILTAGQATADNLPAGLAEIQYMIRVPTLRMAEQVTAVLERNAAAAAAISGCRYER
HWVSKSRPGLANHAMAEIAYEALSTVGPPRWDEAARAIGREIQVNAGGTATENPFIDELERLIAPKEAEAILRRDLPPSQ
VNSTSDDYTDMSWHAPTARFYVARPALRSADGHAYPSWVMNALGGISATIDPMVTCAAKTVALAALRLLEDKTARDTAMD
EFVTRTGGGIGGTNWIAPLCDYEPPINFRWPEYVTTARGRDWWIPSHAWPPTNS

Sequences:

>Translated_534_residues
MDKPVTTSAQETALACLDGIQPLLSAWTRTIFDFGETAWREYQSAAWYVERLKREGFTVEEGSGGMPTAFCAHWTNGAGP
TIGLYAEYDAVPGNCQDAVTVKQPRPGLGVEAGGHTDPHSGLGMASLGGLLATKAAMQHHGIPGTLRFTGEPAEKVRGSK
PIHAAKGYYDGLAGMISFHPFYMLPLCNTARWDTHCGAAYAMIYRFVCDEPENWVRAGDGAPIPQAHSAVRAPGANDALM
TMYMASKALRDSMLPHQGGWSISEAILTAGQATADNLPAGLAEIQYMIRVPTLRMAEQVTAVLERNAAAAAAISGCRYER
HWVSKSRPGLANHAMAEIAYEALSTVGPPRWDEAARAIGREIQVNAGGTATENPFIDELERLIAPKEAEAILRRDLPPSQ
VNSTSDDYTDMSWHAPTARFYVARPALRSADGHAYPSWVMNALGGISATIDPMVTCAAKTVALAALRLLEDKTARDTAMD
EFVTRTGGGIGGTNWIAPLCDYEPPINFRWPEYVTTARGRDWWIPSHAWPPTNS
>Mature_534_residues
MDKPVTTSAQETALACLDGIQPLLSAWTRTIFDFGETAWREYQSAAWYVERLKREGFTVEEGSGGMPTAFCAHWTNGAGP
TIGLYAEYDAVPGNCQDAVTVKQPRPGLGVEAGGHTDPHSGLGMASLGGLLATKAAMQHHGIPGTLRFTGEPAEKVRGSK
PIHAAKGYYDGLAGMISFHPFYMLPLCNTARWDTHCGAAYAMIYRFVCDEPENWVRAGDGAPIPQAHSAVRAPGANDALM
TMYMASKALRDSMLPHQGGWSISEAILTAGQATADNLPAGLAEIQYMIRVPTLRMAEQVTAVLERNAAAAAAISGCRYER
HWVSKSRPGLANHAMAEIAYEALSTVGPPRWDEAARAIGREIQVNAGGTATENPFIDELERLIAPKEAEAILRRDLPPSQ
VNSTSDDYTDMSWHAPTARFYVARPALRSADGHAYPSWVMNALGGISATIDPMVTCAAKTVALAALRLLEDKTARDTAMD
EFVTRTGGGIGGTNWIAPLCDYEPPINFRWPEYVTTARGRDWWIPSHAWPPTNS

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787598, Length=454, Percent_Identity=26.431718061674, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 57717; Mature: 57717

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPVTTSAQETALACLDGIQPLLSAWTRTIFDFGETAWREYQSAAWYVERLKREGFTVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
EGSGGMPTAFCAHWTNGAGPTIGLYAEYDAVPGNCQDAVTVKQPRPGLGVEAGGHTDPHS
CCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
GLGMASLGGLLATKAAMQHHGIPGTLRFTGEPAEKVRGSKPIHAAKGYYDGLAGMISFHP
CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCHHHCCHHHHHHHHHHHCC
FYMLPLCNTARWDTHCGAAYAMIYRFVCDEPENWVRAGDGAPIPQAHSAVRAPGANDALM
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHEECCCCCCCCHHHHHHCCCCCCHHHH
TMYMASKALRDSMLPHQGGWSISEAILTAGQATADNLPAGLAEIQYMIRVPTLRMAEQVT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
AVLERNAAAAAAISGCRYERHWVSKSRPGLANHAMAEIAYEALSTVGPPRWDEAARAIGR
HHHHHCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
EIQVNAGGTATENPFIDELERLIAPKEAEAILRRDLPPSQVNSTSDDYTDMSWHAPTARF
EEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEE
YVARPALRSADGHAYPSWVMNALGGISATIDPMVTCAAKTVALAALRLLEDKTARDTAMD
EEECCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVTRTGGGIGGTNWIAPLCDYEPPINFRWPEYVTTARGRDWWIPSHAWPPTNS
HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKPVTTSAQETALACLDGIQPLLSAWTRTIFDFGETAWREYQSAAWYVERLKREGFTVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
EGSGGMPTAFCAHWTNGAGPTIGLYAEYDAVPGNCQDAVTVKQPRPGLGVEAGGHTDPHS
CCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
GLGMASLGGLLATKAAMQHHGIPGTLRFTGEPAEKVRGSKPIHAAKGYYDGLAGMISFHP
CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCCCHHHCCHHHHHHHHHHHCC
FYMLPLCNTARWDTHCGAAYAMIYRFVCDEPENWVRAGDGAPIPQAHSAVRAPGANDALM
EEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHEECCCCCCCCHHHHHHCCCCCCHHHH
TMYMASKALRDSMLPHQGGWSISEAILTAGQATADNLPAGLAEIQYMIRVPTLRMAEQVT
HHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHH
AVLERNAAAAAAISGCRYERHWVSKSRPGLANHAMAEIAYEALSTVGPPRWDEAARAIGR
HHHHHCHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
EIQVNAGGTATENPFIDELERLIAPKEAEAILRRDLPPSQVNSTSDDYTDMSWHAPTARF
EEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEE
YVARPALRSADGHAYPSWVMNALGGISATIDPMVTCAAKTVALAALRLLEDKTARDTAMD
EEECCHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFVTRTGGGIGGTNWIAPLCDYEPPINFRWPEYVTTARGRDWWIPSHAWPPTNS
HHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]