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The map label for this gene is betI

Identifier: 13476325

GI number: 13476325

Start: 6304482

End: 6305072

Strand: Reverse

Name: betI

Synonym: mll7613

Alternate gene names: 13476325

Gene position: 6305072-6304482 (Counterclockwise)

Preceding gene: 13476328

Following gene: 13476324

Centisome position: 89.61

GC content: 64.3

Gene sequence:

>591_bases
ATGCCAAAAGTCGGAATGGAGCCACTGCGCCGCAAGGCGCTTATCGACGCGACGATCTCGGCGATCGGCGAACGCGGCTC
GCTCGACGTGACCATGTCCGAGATCGCTGGCCGCGCCGGCGTGTCCTCGGCCCTTGCCCACCATTATTTCGGCGCCAAGG
ACGAATTGCTGTTCGCGACGATGCGGCACATTCTCGCCGAACTGACCATCGACATGCGCCGCGCCCTGCAATCCGCCAAG
TCCCCGCGCGAACGCGTCTCCGCCGTGGTCGCCGTCAACTTCTCCGACATCCAGTTCCAGGCCCAAACCATTGCAGCCTG
GCTTGCCTTCTATGTCGAGGCGCAGAAATCATCGGCGTTGCGCCGATTGCTCAAGATCTATGCGCGGCGGCTGCATTCGA
ACCTGATGAGCGGGCTGACCGGCATCCTGCCCAGGGCCGAGGCCGACAGCGCCGCCGAAGCCACAGCGGCGATGATCGAC
GGACTCTACATCAGGCGGGCGCTGAAGGACGGCGTGCCCAACGCCGCGACCGCGATCGCGCTGGTCGAGGACTATCTCGA
AACCAAACTCGGCGAGCGGCAAAAGCAGTGA

Upstream 100 bases:

>100_bases
CGGAACAGGACAATCGCTTGGTACAGCTCGCGCCCACGTCGATTTTTTGTTGATTGACCCGTCAATAAAAAATAATCTCC
GCGCAAAAATCGGGAGCAGC

Downstream 100 bases:

>100_bases
CAGCGAAGCGACCCAATTTCCTGATCGTCATGGTCGATCAGCTCAACGGGACTTTTTTTCCCGATGGGCCTGCCGCGTTT
CTGCACGCGCCGCATCTGAA

Product: transcriptional regulator BetI

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPKVGMEPLRRKALIDATISAIGERGSLDVTMSEIAGRAGVSSALAHHYFGAKDELLFATMRHILAELTIDMRRALQSAK
SPRERVSAVVAVNFSDIQFQAQTIAAWLAFYVEAQKSSALRRLLKIYARRLHSNLMSGLTGILPRAEADSAAEATAAMID
GLYIRRALKDGVPNAATAIALVEDYLETKLGERQKQ

Sequences:

>Translated_196_residues
MPKVGMEPLRRKALIDATISAIGERGSLDVTMSEIAGRAGVSSALAHHYFGAKDELLFATMRHILAELTIDMRRALQSAK
SPRERVSAVVAVNFSDIQFQAQTIAAWLAFYVEAQKSSALRRLLKIYARRLHSNLMSGLTGILPRAEADSAAEATAAMID
GLYIRRALKDGVPNAATAIALVEDYLETKLGERQKQ
>Mature_195_residues
PKVGMEPLRRKALIDATISAIGERGSLDVTMSEIAGRAGVSSALAHHYFGAKDELLFATMRHILAELTIDMRRALQSAKS
PRERVSAVVAVNFSDIQFQAQTIAAWLAFYVEAQKSSALRRLLKIYARRLHSNLMSGLTGILPRAEADSAAEATAAMIDG
LYIRRALKDGVPNAATAIALVEDYLETKLGERQKQ

Specific function: Repressor involved in choline regulation of the bet genes

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1786505, Length=193, Percent_Identity=40.4145077720207, Blast_Score=133, Evalue=8e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BETI_RHILO (Q985M2)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_107895.1
- ProteinModelPortal:   Q985M2
- GeneID:   1230550
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll7613
- NMPDR:   fig|266835.1.peg.5996
- HOGENOM:   HBG684746
- OMA:   INHYFGG
- ProtClustDB:   PRK00767
- HAMAP:   MF_00768
- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR017757
- InterPro:   IPR001647
- Gene3D:   G3DSA:1.10.357.10
- PRINTS:   PR00455
- TIGRFAMs:   TIGR03384

Pfam domain/function: PF00440 TetR_N; SSF46689 Homeodomain_like; SSF48498 TetR_like_C

EC number: NA

Molecular weight: Translated: 21396; Mature: 21265

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS01081 HTH_TETR_1; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKVGMEPLRRKALIDATISAIGERGSLDVTMSEIAGRAGVSSALAHHYFGAKDELLFAT
CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
MRHILAELTIDMRRALQSAKSPRERVSAVVAVNFSDIQFQAQTIAAWLAFYVEAQKSSAL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLKIYARRLHSNLMSGLTGILPRAEADSAAEATAAMIDGLYIRRALKDGVPNAATAIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LVEDYLETKLGERQKQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKVGMEPLRRKALIDATISAIGERGSLDVTMSEIAGRAGVSSALAHHYFGAKDELLFAT
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCHHHHHHHHHCCCCHHHHHHH
MRHILAELTIDMRRALQSAKSPRERVSAVVAVNFSDIQFQAQTIAAWLAFYVEAQKSSAL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLLKIYARRLHSNLMSGLTGILPRAEADSAAEATAAMIDGLYIRRALKDGVPNAATAIA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LVEDYLETKLGERQKQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968