| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476328
Identifier: 13476328
GI number: 13476328
Start: 6307562
End: 6308944
Strand: Reverse
Name: 13476328
Synonym: mll7617
Alternate gene names: NA
Gene position: 6308944-6307562 (Counterclockwise)
Preceding gene: 13476330
Following gene: 13476325
Centisome position: 89.67
GC content: 63.2
Gene sequence:
>1383_bases GTGCCGATGTTGAACAGACGAACGCTGCTGACAGGAACCGCCGGCTTTGCCGTTGTGGGCCTCGCGCTTGGCAAGGCGGC GGCCGCTGGCCTGACCGGCATTGAAAAAGCCTCGATGCGCGGTTCCATCAATGCCACCGAACTCGGCGTCCAGCCCGGCA CATTCGACGACCAGAGCAAGGCCTTCGCCAAGCTGCTGCGCGACGCGAACAGCCGGGACGTGCCGGTGTTCCTGCCGGCT GGCACCTATGTGGTATCCAATCTCTCACTGCCCAGCCGCGTGCGTCTTTCCGGCGTACCGGGCGCCACGCGGATCGTCTA TGGCGGCGACGGCCACCTTTTCATGGCCGAACAGGCCGACCATATTGAATTGAGCGGGCTGGTTTTCGATGGTTCGAACC GCTCGATGGGCGACTATGCGCAAGGGCTGCTCGATCTTCGACGGGTCGGCCATCTCGTTGTCGACAATTGCCAGATAACC GGCAGCGGCAAGAACGGGCTGGCGCTGGAACATGCGACAGGCCGCATCGAACGCTCCGACATATCGGGCGCGGCGGACGC CGGCATCTATTCGGTCGAGGCGGCTGGACTGGCAATATCAGGCAACACGGTCTCCGACTGTGCTAATGGCGGCATCCTCG TGCATCGCTGGCAGGCGGCCGAAGACGGCACGATGGTCACGGGCAACCGGGTCGAACGCATCGGCGCGCGCAGCGGTGGA ACCGGCCAGAACGGCAATGGCATCAACGCCTTCCGTGCCGGAAACGTCATTATTTCGGGCAATGTCGTGTCGGATTGCGC TTTCTCGGCAATCCGCGCCAACAGTTCCAGCAATCTGCAGATTTCCGGCAATACCTGCTCGCGCTCGGGCGAGACCGCGG TCTATTCCGAATTCTCGTTCGAGGGCGCTGTCATCAGCAACAACATCGTCGATGGCGCGGCCAACGGCATCTCGATCGTC AACTTCAACGAAGGCGGCCGCATGGGTGTCTGCTCCGGCAACATCGTGCGCAATCTGTCGACCAGCGGCCCCTACACCGC CGATCCGCCCGGCTTCGGCGTCGGCATCGGCGTCGAGGCCGACACCATCGCTTCCAACAACGTCATCGAGAACGCGCCGC TCTACGGCATGTCGATCGGCTGGGGGCCTTACCTGCGCAATGTGGTGGCGACGGGAAACATCATCCGCAAGGCTGGGACA GGCATCGTCGTCAGTGTGGTCGAGGGTGCCGGCACGGCCGTCATCTCCGACAACGTCATCGACGGCGCGTTGAACGGCGC GGTCATCGGCCAGCGTTGGGCCGAGCCTGTGACAGCCGACCTTACCCAGTTAAGCAACAGCGGCTTTGCGCATTTGACCG TTGAGCGCAACCGCGTCAGTTGA
Upstream 100 bases:
>100_bases CTGAACCTAAGCCTCGAGCGACAGCTCGACAAGTCATTGTGAAAAGGAACGGTACGTTTGGCACGATTCCTGCGACATCA GGCTTGAACGCTGAGATTCT
Downstream 100 bases:
>100_bases GGGCGGCAGTCGGCCTCAGCGCCCCCACCTTGGCTCCGATCCGGCTTTTGATCGGCGCGTTTGCCAGTTCGATGAGCTTC GCCGTCAGGGCCTCGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Pectin Lyase Fold; Parallel Beta-Helix Repeat-Containing Protein
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MPMLNRRTLLTGTAGFAVVGLALGKAAAAGLTGIEKASMRGSINATELGVQPGTFDDQSKAFAKLLRDANSRDVPVFLPA GTYVVSNLSLPSRVRLSGVPGATRIVYGGDGHLFMAEQADHIELSGLVFDGSNRSMGDYAQGLLDLRRVGHLVVDNCQIT GSGKNGLALEHATGRIERSDISGAADAGIYSVEAAGLAISGNTVSDCANGGILVHRWQAAEDGTMVTGNRVERIGARSGG TGQNGNGINAFRAGNVIISGNVVSDCAFSAIRANSSSNLQISGNTCSRSGETAVYSEFSFEGAVISNNIVDGAANGISIV NFNEGGRMGVCSGNIVRNLSTSGPYTADPPGFGVGIGVEADTIASNNVIENAPLYGMSIGWGPYLRNVVATGNIIRKAGT GIVVSVVEGAGTAVISDNVIDGALNGAVIGQRWAEPVTADLTQLSNSGFAHLTVERNRVS
Sequences:
>Translated_460_residues MPMLNRRTLLTGTAGFAVVGLALGKAAAAGLTGIEKASMRGSINATELGVQPGTFDDQSKAFAKLLRDANSRDVPVFLPA GTYVVSNLSLPSRVRLSGVPGATRIVYGGDGHLFMAEQADHIELSGLVFDGSNRSMGDYAQGLLDLRRVGHLVVDNCQIT GSGKNGLALEHATGRIERSDISGAADAGIYSVEAAGLAISGNTVSDCANGGILVHRWQAAEDGTMVTGNRVERIGARSGG TGQNGNGINAFRAGNVIISGNVVSDCAFSAIRANSSSNLQISGNTCSRSGETAVYSEFSFEGAVISNNIVDGAANGISIV NFNEGGRMGVCSGNIVRNLSTSGPYTADPPGFGVGIGVEADTIASNNVIENAPLYGMSIGWGPYLRNVVATGNIIRKAGT GIVVSVVEGAGTAVISDNVIDGALNGAVIGQRWAEPVTADLTQLSNSGFAHLTVERNRVS >Mature_459_residues PMLNRRTLLTGTAGFAVVGLALGKAAAAGLTGIEKASMRGSINATELGVQPGTFDDQSKAFAKLLRDANSRDVPVFLPAG TYVVSNLSLPSRVRLSGVPGATRIVYGGDGHLFMAEQADHIELSGLVFDGSNRSMGDYAQGLLDLRRVGHLVVDNCQITG SGKNGLALEHATGRIERSDISGAADAGIYSVEAAGLAISGNTVSDCANGGILVHRWQAAEDGTMVTGNRVERIGARSGGT GQNGNGINAFRAGNVIISGNVVSDCAFSAIRANSSSNLQISGNTCSRSGETAVYSEFSFEGAVISNNIVDGAANGISIVN FNEGGRMGVCSGNIVRNLSTSGPYTADPPGFGVGIGVEADTIASNNVIENAPLYGMSIGWGPYLRNVVATGNIIRKAGTG IVVSVVEGAGTAVISDNVIDGALNGAVIGQRWAEPVTADLTQLSNSGFAHLTVERNRVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47117; Mature: 46986
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMLNRRTLLTGTAGFAVVGLALGKAAAAGLTGIEKASMRGSINATELGVQPGTFDDQSK CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHEECCCCCCCCCHHH AFAKLLRDANSRDVPVFLPAGTYVVSNLSLPSRVRLSGVPGATRIVYGGDGHLFMAEQAD HHHHHHHCCCCCCCEEEECCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCEEEECCCC HIELSGLVFDGSNRSMGDYAQGLLDLRRVGHLVVDNCQITGSGKNGLALEHATGRIERSD CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEECCCCCEECCC ISGAADAGIYSVEAAGLAISGNTVSDCANGGILVHRWQAAEDGTMVTGNRVERIGARSGG CCCCCCCCEEEEEECCEEEECCCHHHHCCCCEEEEEEECCCCCEEEECCHHHHHCCCCCC TGQNGNGINAFRAGNVIISGNVVSDCAFSAIRANSSSNLQISGNTCSRSGETAVYSEFSF CCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCC EGAVISNNIVDGAANGISIVNFNEGGRMGVCSGNIVRNLSTSGPYTADPPGFGVGIGVEA CCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEECCCC DTIASNNVIENAPLYGMSIGWGPYLRNVVATGNIIRKAGTGIVVSVVEGAGTAVISDNVI CCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEECCCCCEEEEEECCCCEEEEECCCC DGALNGAVIGQRWAEPVTADLTQLSNSGFAHLTVERNRVS CCCCCCCEECHHHCCCHHHHHHHHCCCCEEEEEEECCCCC >Mature Secondary Structure PMLNRRTLLTGTAGFAVVGLALGKAAAAGLTGIEKASMRGSINATELGVQPGTFDDQSK CCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHEECCCCCCCCCHHH AFAKLLRDANSRDVPVFLPAGTYVVSNLSLPSRVRLSGVPGATRIVYGGDGHLFMAEQAD HHHHHHHCCCCCCCEEEECCCCEEEECCCCCCEEEEECCCCCEEEEECCCCCEEEECCCC HIELSGLVFDGSNRSMGDYAQGLLDLRRVGHLVVDNCQITGSGKNGLALEHATGRIERSD CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECEEEECCCCCCEEEECCCCCEECCC ISGAADAGIYSVEAAGLAISGNTVSDCANGGILVHRWQAAEDGTMVTGNRVERIGARSGG CCCCCCCCEEEEEECCEEEECCCHHHHCCCCEEEEEEECCCCCEEEECCHHHHHCCCCCC TGQNGNGINAFRAGNVIISGNVVSDCAFSAIRANSSSNLQISGNTCSRSGETAVYSEFSF CCCCCCCEEEEEECCEEEECCCHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEEECCC EGAVISNNIVDGAANGISIVNFNEGGRMGVCSGNIVRNLSTSGPYTADPPGFGVGIGVEA CCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEECCCC DTIASNNVIENAPLYGMSIGWGPYLRNVVATGNIIRKAGTGIVVSVVEGAGTAVISDNVI CCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCEEECCCCCEEEEEECCCCEEEEECCCC DGALNGAVIGQRWAEPVTADLTQLSNSGFAHLTVERNRVS CCCCCCCEECHHHCCCHHHHHHHHCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA