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The map label for this gene is rbsB [H]

Identifier: 13476299

GI number: 13476299

Start: 6267439

End: 6268473

Strand: Direct

Name: rbsB [H]

Synonym: mlr7582

Alternate gene names: 13476299

Gene position: 6267439-6268473 (Clockwise)

Preceding gene: 13476294

Following gene: 13476300

Centisome position: 89.08

GC content: 63.09

Gene sequence:

>1035_bases
GTGACCAATACAAAATTGTTGAAATCGACCGTGTTTGCCGCGGCTGCCCTGGGTCTGATGGCGTTTTCGTCGTCCGCCTC
CGCAGCCGGCGTCGGTGCTTGCCTGATCACCAAGACCGACACCAATCCCTTCTTCGTCAAGATGAAGGAAGGCGCGACCG
CAAAGGCCAAGGAACTCGGCGTCGACCTCAAAACCTATGCCGGCAAGATCGACGGCGACAGCGAGAGCCAGGTGGCGGCG
ATCGAAAGCTGCATTGCCGACGGCGCCAAGGGTATCCTGATCACCGCATCCGACACCAAAGGCATCGTGCCGACCGTGAA
GAAGGCGCGTGACGCCGGCCTGCTGGTGATCGCGCTCGACACGCCGCTCGACCCGATCGATGCTGCCGATGCGACCTTCG
CCACCGACAATCTCGAGGCCGGCAAGCTGATCGGCGCCTGGGCCGCCGCGACGCTCGGCGACAAGGCCAAGGACGCCAAG
ATCGGCTTCCTCGACCTGACGCCGTCGCAGCCGACCGTGGACGTGCTGCGCGACCAGGGCTTCATGATGGGCTACGGTAT
TGACGTGAAGGATCCCAACAAGATCGGCGACGAAACCGATCCGCGCATCGTCGGCCACGACGTCACCAACGGCAACGAGG
AGGGCGGCCGCAAGGCGATGGAGAACCTTCTGCAGAAGGACAACACCATCAACGTCATCCACACCATCAACGAGCCCGCC
GCGGTCGGCGCCTACCAGGCGCTCAAGGCTGTCGGACTTGAAAAGCAGGTGCTGATCGTCTCCGTCGACGGCGGCTGCCC
CGGCGTGAAGTCGGTGACGGAAGGTGTCATCGGCGCGACGTCGCAGCAGTACCCGCTGCAGATGGCGGCGCTCGGTATCC
AGGCGATCGCCGCCTTCGCCAAGGATGGAACCAAGCCGAAGCCGACCGAAGGCAAGAATTTCTTCGACACCGGCGTCAAT
TTGGTGACCGACAAGCCAGCCAAGGGCGTAAAGTCCATCGACACCAAGGAAGGCCTCGCCAAGTGCTGGGGCTGA

Upstream 100 bases:

>100_bases
TGGTGTCTGTTGAGGGGGCGTCCACGCTGGGAGAATTTCGTAGGATGCGCCGTAGATGCCGGTGGCCGGCATCCGGAATG
GTTCCACTGGGAGGAAGATC

Downstream 100 bases:

>100_bases
TGCTGGTCTGACCGGCAATTACCGAACTCGAGCGGTCGGGGCTTGATCCCCGGCCGCTTCGGGTGGACGATGGGTCGCGT
GACCGCGAACAATCCCGGCG

Product: sugar ABC transporter, periplasmic sugar-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTNTKLLKSTVFAAAALGLMAFSSSASAAGVGACLITKTDTNPFFVKMKEGATAKAKELGVDLKTYAGKIDGDSESQVAA
IESCIADGAKGILITASDTKGIVPTVKKARDAGLLVIALDTPLDPIDAADATFATDNLEAGKLIGAWAAATLGDKAKDAK
IGFLDLTPSQPTVDVLRDQGFMMGYGIDVKDPNKIGDETDPRIVGHDVTNGNEEGGRKAMENLLQKDNTINVIHTINEPA
AVGAYQALKAVGLEKQVLIVSVDGGCPGVKSVTEGVIGATSQQYPLQMAALGIQAIAAFAKDGTKPKPTEGKNFFDTGVN
LVTDKPAKGVKSIDTKEGLAKCWG

Sequences:

>Translated_344_residues
MTNTKLLKSTVFAAAALGLMAFSSSASAAGVGACLITKTDTNPFFVKMKEGATAKAKELGVDLKTYAGKIDGDSESQVAA
IESCIADGAKGILITASDTKGIVPTVKKARDAGLLVIALDTPLDPIDAADATFATDNLEAGKLIGAWAAATLGDKAKDAK
IGFLDLTPSQPTVDVLRDQGFMMGYGIDVKDPNKIGDETDPRIVGHDVTNGNEEGGRKAMENLLQKDNTINVIHTINEPA
AVGAYQALKAVGLEKQVLIVSVDGGCPGVKSVTEGVIGATSQQYPLQMAALGIQAIAAFAKDGTKPKPTEGKNFFDTGVN
LVTDKPAKGVKSIDTKEGLAKCWG
>Mature_343_residues
TNTKLLKSTVFAAAALGLMAFSSSASAAGVGACLITKTDTNPFFVKMKEGATAKAKELGVDLKTYAGKIDGDSESQVAAI
ESCIADGAKGILITASDTKGIVPTVKKARDAGLLVIALDTPLDPIDAADATFATDNLEAGKLIGAWAAATLGDKAKDAKI
GFLDLTPSQPTVDVLRDQGFMMGYGIDVKDPNKIGDETDPRIVGHDVTNGNEEGGRKAMENLLQKDNTINVIHTINEPAA
VGAYQALKAVGLEKQVLIVSVDGGCPGVKSVTEGVIGATSQQYPLQMAALGIQAIAAFAKDGTKPKPTEGKNFFDTGVNL
VTDKPAKGVKSIDTKEGLAKCWG

Specific function: Involved in the high-affinity D-ribose membrane transport system and also serves as the primary chemoreceptor for chemotaxis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790674, Length=278, Percent_Identity=27.3381294964029, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1790526, Length=308, Percent_Identity=27.5974025974026, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1790192, Length=297, Percent_Identity=27.6094276094276, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 35540; Mature: 35409

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTKLLKSTVFAAAALGLMAFSSSASAAGVGACLITKTDTNPFFVKMKEGATAKAKELG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHC
VDLKTYAGKIDGDSESQVAAIESCIADGAKGILITASDTKGIVPTVKKARDAGLLVIALD
CCHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEC
TPLDPIDAADATFATDNLEAGKLIGAWAAATLGDKAKDAKIGFLDLTPSQPTVDVLRDQG
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCC
FMMGYGIDVKDPNKIGDETDPRIVGHDVTNGNEEGGRKAMENLLQKDNTINVIHTINEPA
EEEEECCCCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCH
AVGAYQALKAVGLEKQVLIVSVDGGCPGVKSVTEGVIGATSQQYPLQMAALGIQAIAAFA
HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KDGTKPKPTEGKNFFDTGVNLVTDKPAKGVKSIDTKEGLAKCWG
HCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
TNTKLLKSTVFAAAALGLMAFSSSASAAGVGACLITKTDTNPFFVKMKEGATAKAKELG
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHC
VDLKTYAGKIDGDSESQVAAIESCIADGAKGILITASDTKGIVPTVKKARDAGLLVIALD
CCHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCEEEEEEC
TPLDPIDAADATFATDNLEAGKLIGAWAAATLGDKAKDAKIGFLDLTPSQPTVDVLRDQG
CCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHCCC
FMMGYGIDVKDPNKIGDETDPRIVGHDVTNGNEEGGRKAMENLLQKDNTINVIHTINEPA
EEEEECCCCCCCHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCH
AVGAYQALKAVGLEKQVLIVSVDGGCPGVKSVTEGVIGATSQQYPLQMAALGIQAIAAFA
HHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
KDGTKPKPTEGKNFFDTGVNLVTDKPAKGVKSIDTKEGLAKCWG
HCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]