Click here to switch to the map view.

The map label for this gene is ywfA [H]

Identifier: 13476066

GI number: 13476066

Start: 6017572

End: 6018741

Strand: Reverse

Name: ywfA [H]

Synonym: mll7282

Alternate gene names: 13476066

Gene position: 6018741-6017572 (Counterclockwise)

Preceding gene: 13476068

Following gene: 13476065

Centisome position: 85.54

GC content: 67.18

Gene sequence:

>1170_bases
ATGTCGAACAGCAATCAAGCCACAGCCCTGGCAGCCGACGCCAGGCCGCCGATCCCGGCCCTCGCCTATCTGTTGACCGG
CTGCATCGCCGTGATCGGCTCGAATTCGCTGGTGCTAGGGCCGATAGCCCCGGCGGTGGCGTCGTCCTTCGCAACCAGCG
TCCCGGCCGTCATGGTCGCGGCGGCCGCCTTTGGCCTCGGCACCTCGGCAAGCGCCCTGTTCCTCGCCCGCTACATAGAC
CGGCTTGGCGCTCGCCGGATGCTGCAAGGGGCATTGCTGTTGCTGGCCATTGCTCTCGTCGCCAGCGCGGCCGCACCGAT
ACTGATCATGCTGGTCGTGGCCCAGCTCGTCGCCGGTATCGCCGCCGGCGTCGCCATGCCGGCGATCTATGCGAGTTCGG
CGGCGATCGCGCCGCCCGGCCGCGAAAGCGGCACCATCGGCGTCGTGCTGACCGGATGGACGCTCAGCATGGTGGCCGGC
GTTTCGCTCTCGGCCGTGCTTGCCGATCTCGTTCATTGGCGCGCCGTCTTCGCCGCCGTCGCGGTGCTTGCAATGCTGGC
GTTGGCCAGCCTCACCATGACGTCACTAAGCGACATCAGGAAGAGCGGCCCGGCGCCAACACCGCTGGCGGCACTCAGCA
TTCCCGGCATTGTGCCGCTTCTCATCGCCTGCGCGGCCTTCATGACCGCCTTTTACGGTGTCTATGGCTATCTCGGCGAC
CACCTGCACAGCGGACTGGGCAAGTCGGTGAGCGCCAATGGCTGGGCCGCGCTCGCCTACGGCATCGGCTTCGGCACGGC
TGCCCTCCTCGACGGCGTGATCGATCGCCTGGGCGCCCGCCGCGTCATGCCGTTCGCCTATCTTCTTGTCGCCGCCGTCT
ATGTCGCCATTGCCGCGACGAGCAACAGTTTCGGCCTGACGCTGGCCATGGTGGCGGTGTGGGGGCTTGCCAATCATTTC
GGGCTGAACGTCCTCGTGATGCGCCTCTCGGCACTCGATCCCTCACGGCGCGGCACGATCATGGGCCTGAACAGCGCGGT
GACCTATCTGGCGGTCTTTATCGGCACCACCGGCTTCGGGCCGCTCTATTCCAGCTTCGGCTTTGCCGTCTGCGCGATGG
TTGCGGCGCTGCTGATGCTGGTTGCCGCGTCGGCGGCGGCATGGCGCTAA

Upstream 100 bases:

>100_bases
TATCGCGGGGCGCCGGCCTGTTCTGCAGAATGCCATCTGTTTCTTCATCCATGTCGACAATCCTGATTGCCACGGAATTT
AATACGGCCATTATGCTGAT

Downstream 100 bases:

>100_bases
GGTGCATTGATATTCAGGTGATGCCGGCCTGCAAACGGCGGCTTCCTGCGCTTCCGGTGCTCACGTACGAAAAGTACGCT
CCGCTCCGGTTCTCGGAAAG

Product: multidrug ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSNSNQATALAADARPPIPALAYLLTGCIAVIGSNSLVLGPIAPAVASSFATSVPAVMVAAAAFGLGTSASALFLARYID
RLGARRMLQGALLLLAIALVASAAAPILIMLVVAQLVAGIAAGVAMPAIYASSAAIAPPGRESGTIGVVLTGWTLSMVAG
VSLSAVLADLVHWRAVFAAVAVLAMLALASLTMTSLSDIRKSGPAPTPLAALSIPGIVPLLIACAAFMTAFYGVYGYLGD
HLHSGLGKSVSANGWAALAYGIGFGTAALLDGVIDRLGARRVMPFAYLLVAAVYVAIAATSNSFGLTLAMVAVWGLANHF
GLNVLVMRLSALDPSRRGTIMGLNSAVTYLAVFIGTTGFGPLYSSFGFAVCAMVAALLMLVAASAAAWR

Sequences:

>Translated_389_residues
MSNSNQATALAADARPPIPALAYLLTGCIAVIGSNSLVLGPIAPAVASSFATSVPAVMVAAAAFGLGTSASALFLARYID
RLGARRMLQGALLLLAIALVASAAAPILIMLVVAQLVAGIAAGVAMPAIYASSAAIAPPGRESGTIGVVLTGWTLSMVAG
VSLSAVLADLVHWRAVFAAVAVLAMLALASLTMTSLSDIRKSGPAPTPLAALSIPGIVPLLIACAAFMTAFYGVYGYLGD
HLHSGLGKSVSANGWAALAYGIGFGTAALLDGVIDRLGARRVMPFAYLLVAAVYVAIAATSNSFGLTLAMVAVWGLANHF
GLNVLVMRLSALDPSRRGTIMGLNSAVTYLAVFIGTTGFGPLYSSFGFAVCAMVAALLMLVAASAAAWR
>Mature_388_residues
SNSNQATALAADARPPIPALAYLLTGCIAVIGSNSLVLGPIAPAVASSFATSVPAVMVAAAAFGLGTSASALFLARYIDR
LGARRMLQGALLLLAIALVASAAAPILIMLVVAQLVAGIAAGVAMPAIYASSAAIAPPGRESGTIGVVLTGWTLSMVAGV
SLSAVLADLVHWRAVFAAVAVLAMLALASLTMTSLSDIRKSGPAPTPLAALSIPGIVPLLIACAAFMTAFYGVYGYLGDH
LHSGLGKSVSANGWAALAYGIGFGTAALLDGVIDRLGARRVMPFAYLLVAAVYVAIAATSNSFGLTLAMVAVWGLANHFG
LNVLVMRLSALDPSRRGTIMGLNSAVTYLAVFIGTTGFGPLYSSFGFAVCAMVAALLMLVAASAAAWR

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 39153; Mature: 39022

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSNQATALAADARPPIPALAYLLTGCIAVIGSNSLVLGPIAPAVASSFATSVPAVMVA
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH
AAAFGLGTSASALFLARYIDRLGARRMLQGALLLLAIALVASAAAPILIMLVVAQLVAGI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAGVAMPAIYASSAAIAPPGRESGTIGVVLTGWTLSMVAGVSLSAVLADLVHWRAVFAAV
HHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVLAMLALASLTMTSLSDIRKSGPAPTPLAALSIPGIVPLLIACAAFMTAFYGVYGYLGD
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLHSGLGKSVSANGWAALAYGIGFGTAALLDGVIDRLGARRVMPFAYLLVAAVYVAIAAT
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
SNSFGLTLAMVAVWGLANHFGLNVLVMRLSALDPSRRGTIMGLNSAVTYLAVFIGTTGFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHCCCCH
PLYSSFGFAVCAMVAALLMLVAASAAAWR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SNSNQATALAADARPPIPALAYLLTGCIAVIGSNSLVLGPIAPAVASSFATSVPAVMVA
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]