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The map label for this gene is fucR [H]

Identifier: 13476060

GI number: 13476060

Start: 6012805

End: 6013653

Strand: Direct

Name: fucR [H]

Synonym: mlr7274

Alternate gene names: 13476060

Gene position: 6012805-6013653 (Clockwise)

Preceding gene: 13476058

Following gene: 13476061

Centisome position: 85.46

GC content: 63.96

Gene sequence:

>849_bases
TTGATACTTTTGCGACGGAAGCTGTTATATCTGGCGCTCGATCAAGGAGCCGCGCTTTGGCGTTGGCGGTCAGTGGCGAT
GAAAAGCGACGTCAGACGGCAAGGCATTATGGAGTTTCTGATGGACACCGGTCAGGCCGGCGTCGACGATCTCGCCTTGC
GCTTTGGCGTCTCGAAGATGACCGTGCACCGCGACCTCGACGAGCTCGAGGAAAGCGGTTTCCTGCGCAAGGTGCGCGGC
GGCGCCTCGATCCAGCCGAGCAGCCTGTTCGAAAGCGACTTCCGCTACCGGCAGAAGCAGGCGACCGAGGAAAAGCAGCG
TCTGGCCGCGGCCGCCGTGGCCATGATCGAACCCGGCCAGACGGTGATCATCGATGACGGCTCGACAGCGGGCGGCATTG
CGCGCCATCTCGCCGACCTGCGACCGCTGACGGTGATCTCCAACAATCTTGCCGTGATCCAGGAACTGGCCGGCGCGGGA
GGCATCAACCTGATCGCGCTCGGCGGCCAGTACAGCAAGAAGTTTCACGGATTCTTCGGCCTGCTGGCCGAGGCCTCGCT
CAAATCACTGCGCGCCGACGTCGCCTTCCTGTCGTCTTCGGCCATCCATGGCGCTTCCGCCTTCCACCAGGATCAGGAGG
TGGTGCAGGCCAAGCGGCTGATGATGGCGGCGGCGACCCGCAAATATCTGCTGGTCGATCACGGCAAGTTTGGCCGCACG
GCGCTGCACTTCCTGACCGATCTCAGCGCATTCGACGCGGTCTTCACCGGCCGTGCGCCAGAGCCGGGCGTACGCGCGGC
GCTGGAGGCCGCCGGCGTTTCGCTGACGGTGATGGACAAGGGATCATGA

Upstream 100 bases:

>100_bases
CCGCAACCGTCACAGCCCGTCGCGGCAGCAATTCTTGTTACAGCGCCGCGATCAGAGCAAGCGGAATATCCCACGAATTT
ATCCCATTATCACAAAATAT

Downstream 100 bases:

>100_bases
CCCCTGAAATCGGCAGATCGTGATCAACAAAGTCAAGGAGCAGTGCGCGTGGTCTACTGGGTCGGTACAAGCTGGAAGAT
GAACAAGACGCTCGCCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MILLRRKLLYLALDQGAALWRWRSVAMKSDVRRQGIMEFLMDTGQAGVDDLALRFGVSKMTVHRDLDELEESGFLRKVRG
GASIQPSSLFESDFRYRQKQATEEKQRLAAAAVAMIEPGQTVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAG
GINLIALGGQYSKKFHGFFGLLAEASLKSLRADVAFLSSSAIHGASAFHQDQEVVQAKRLMMAAATRKYLLVDHGKFGRT
ALHFLTDLSAFDAVFTGRAPEPGVRAALEAAGVSLTVMDKGS

Sequences:

>Translated_282_residues
MILLRRKLLYLALDQGAALWRWRSVAMKSDVRRQGIMEFLMDTGQAGVDDLALRFGVSKMTVHRDLDELEESGFLRKVRG
GASIQPSSLFESDFRYRQKQATEEKQRLAAAAVAMIEPGQTVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAG
GINLIALGGQYSKKFHGFFGLLAEASLKSLRADVAFLSSSAIHGASAFHQDQEVVQAKRLMMAAATRKYLLVDHGKFGRT
ALHFLTDLSAFDAVFTGRAPEPGVRAALEAAGVSLTVMDKGS
>Mature_282_residues
MILLRRKLLYLALDQGAALWRWRSVAMKSDVRRQGIMEFLMDTGQAGVDDLALRFGVSKMTVHRDLDELEESGFLRKVRG
GASIQPSSLFESDFRYRQKQATEEKQRLAAAAVAMIEPGQTVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAG
GINLIALGGQYSKKFHGFFGLLAEASLKSLRADVAFLSSSAIHGASAFHQDQEVVQAKRLMMAAATRKYLLVDHGKFGRT
ALHFLTDLSAFDAVFTGRAPEPGVRAALEAAGVSLTVMDKGS

Specific function: Transcriptional activator of the fuc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789829, Length=250, Percent_Identity=31.6, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI226510968, Length=238, Percent_Identity=30.672268907563, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1789519, Length=252, Percent_Identity=31.3492063492063, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790635, Length=246, Percent_Identity=31.3008130081301, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1789059, Length=254, Percent_Identity=29.5275590551181, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788069, Length=231, Percent_Identity=29.4372294372294, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082344, Length=250, Percent_Identity=27.6, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787540, Length=249, Percent_Identity=26.9076305220884, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787063, Length=229, Percent_Identity=27.5109170305677, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789170, Length=213, Percent_Identity=30.0469483568075, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014036
- InterPro:   IPR001034
- InterPro:   IPR018356
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00455 DeoR; PF08220 HTH_DeoR [H]

EC number: NA

Molecular weight: Translated: 30532; Mature: 30532

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLRRKLLYLALDQGAALWRWRSVAMKSDVRRQGIMEFLMDTGQAGVDDLALRFGVSKM
CEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
TVHRDLDELEESGFLRKVRGGASIQPSSLFESDFRYRQKQATEEKQRLAAAAVAMIEPGQ
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAGGINLIALGGQYSKKFHGFFG
EEEEECCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
LLAEASLKSLRADVAFLSSSAIHGASAFHQDQEVVQAKRLMMAAATRKYLLVDHGKFGRT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
ALHFLTDLSAFDAVFTGRAPEPGVRAALEAAGVSLTVMDKGS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure
MILLRRKLLYLALDQGAALWRWRSVAMKSDVRRQGIMEFLMDTGQAGVDDLALRFGVSKM
CEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
TVHRDLDELEESGFLRKVRGGASIQPSSLFESDFRYRQKQATEEKQRLAAAAVAMIEPGQ
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TVIIDDGSTAGGIARHLADLRPLTVISNNLAVIQELAGAGGINLIALGGQYSKKFHGFFG
EEEEECCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHH
LLAEASLKSLRADVAFLSSSAIHGASAFHQDQEVVQAKRLMMAAATRKYLLVDHGKFGRT
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
ALHFLTDLSAFDAVFTGRAPEPGVRAALEAAGVSLTVMDKGS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]