Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13476058

Identifier: 13476058

GI number: 13476058

Start: 6010645

End: 6011484

Strand: Direct

Name: 13476058

Synonym: mlr7272

Alternate gene names: NA

Gene position: 6010645-6011484 (Clockwise)

Preceding gene: 13476057

Following gene: 13476060

Centisome position: 85.43

GC content: 62.38

Gene sequence:

>840_bases
GTGCAGCTCACGCATGAATTCATCAATCCCGGCTGGCCCGCTGCGACGATCGTCAAATTCGTCCGCCTGTTTCGCGGCGC
GCTCGGCCGCACCGGCGTGCGTGTCACGTCCGGCATGACCGGTCCTTACGGCAGGCTCAATCATTTCGGTCACCCCGACG
CCGATGTGCGCCGCTACTATGTCGACTGGTTCAAGACCTTTGCCGACATCTCGGCCGAGCTTGGCGCCAGCGGCATGGGC
ACGCAATTCGCCATCTTCACCCATCGCGACTTTGACGACCCCGAGCGTCGCGCGCGGTTGTTCGACATCGCGCTGGACTG
CTGGAGCGAGGTCGCCGAGCACGCCAAGGCGGCCGGCCTGACCTACCTGTTCTGGGAGCCGATGTCGGTTGGCCGCGAGT
TCGGCCACACCATCGAGAACTGCCGGCAACTGCAAGGCGCGATCGACGTCGCTGGTATGGCGATCCCGCTCGAGATGATG
GTCGACATCGACCATGGCGATGTCACATCAAGCAATCCCGCCGACATCGATCCCTATGCCTGGGCCGAGGCCTTTCCCAC
GAAATCGCCGATCATCCACATCAAGCAATCGTCGATGAACAAGGGCGGCCATTGGCCGTTCACGTCAACCTACAATAAGG
ATGGCCGCATCACGCCTGAAAAGCTGCTGGACACGGTGCGGCGCGGCGGCGGCACCGACAACGAGATCTGCCTCGAACTG
TCGTTCCGTGAGCGTGAACCGGTCGACCATCAGGTGGTCGCCATGATCCGCGAGTCCGTCGACTACTGGGCGCCGTTCAT
CGAGACAGGCAGGTCCGATCTTCTGCTAAAGGCCGAATGA

Upstream 100 bases:

>100_bases
GGCCTTCACGCTCTCCCTCAACACCAATCCGCTGGTCAATCGCTTCGCCGATCCGGACGACCTGATCGACACCATCGCCT
ATGACATCGGCATAAGGGCC

Downstream 100 bases:

>100_bases
AAAAACGGGCAGGGGCCGATGCGGCTCCTGCCCGTTGAACTCTTGATGTGAAGTCGCCGGAACTCAGCCGAATTTCGGGT
CGAGGCTGCCCGACTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; D-Erythrulose-1-Phosphate Dehydrogenase; D-Erythrulose-Phosphate Dehydrogenase; Xylose Isomerase-Like TIM Barrel; D-Erythrulose-1-Phosphate Dehydrogenase Protein; Xylose Isomerase Domain-Containing Protein; Erythrulose 4-Phosphate Dehydrogenase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MQLTHEFINPGWPAATIVKFVRLFRGALGRTGVRVTSGMTGPYGRLNHFGHPDADVRRYYVDWFKTFADISAELGASGMG
TQFAIFTHRDFDDPERRARLFDIALDCWSEVAEHAKAAGLTYLFWEPMSVGREFGHTIENCRQLQGAIDVAGMAIPLEMM
VDIDHGDVTSSNPADIDPYAWAEAFPTKSPIIHIKQSSMNKGGHWPFTSTYNKDGRITPEKLLDTVRRGGGTDNEICLEL
SFREREPVDHQVVAMIRESVDYWAPFIETGRSDLLLKAE

Sequences:

>Translated_279_residues
MQLTHEFINPGWPAATIVKFVRLFRGALGRTGVRVTSGMTGPYGRLNHFGHPDADVRRYYVDWFKTFADISAELGASGMG
TQFAIFTHRDFDDPERRARLFDIALDCWSEVAEHAKAAGLTYLFWEPMSVGREFGHTIENCRQLQGAIDVAGMAIPLEMM
VDIDHGDVTSSNPADIDPYAWAEAFPTKSPIIHIKQSSMNKGGHWPFTSTYNKDGRITPEKLLDTVRRGGGTDNEICLEL
SFREREPVDHQVVAMIRESVDYWAPFIETGRSDLLLKAE
>Mature_279_residues
MQLTHEFINPGWPAATIVKFVRLFRGALGRTGVRVTSGMTGPYGRLNHFGHPDADVRRYYVDWFKTFADISAELGASGMG
TQFAIFTHRDFDDPERRARLFDIALDCWSEVAEHAKAAGLTYLFWEPMSVGREFGHTIENCRQLQGAIDVAGMAIPLEMM
VDIDHGDVTSSNPADIDPYAWAEAFPTKSPIIHIKQSSMNKGGHWPFTSTYNKDGRITPEKLLDTVRRGGGTDNEICLEL
SFREREPVDHQVVAMIRESVDYWAPFIETGRSDLLLKAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31384; Mature: 31384

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTHEFINPGWPAATIVKFVRLFRGALGRTGVRVTSGMTGPYGRLNHFGHPDADVRRYY
CCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHH
VDWFKTFADISAELGASGMGTQFAIFTHRDFDDPERRARLFDIALDCWSEVAEHAKAAGL
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYLFWEPMSVGREFGHTIENCRQLQGAIDVAGMAIPLEMMVDIDHGDVTSSNPADIDPYA
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHH
WAEAFPTKSPIIHIKQSSMNKGGHWPFTSTYNKDGRITPEKLLDTVRRGGGTDNEICLEL
HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE
SFREREPVDHQVVAMIRESVDYWAPFIETGRSDLLLKAE
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MQLTHEFINPGWPAATIVKFVRLFRGALGRTGVRVTSGMTGPYGRLNHFGHPDADVRRYY
CCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCHHHHHHH
VDWFKTFADISAELGASGMGTQFAIFTHRDFDDPERRARLFDIALDCWSEVAEHAKAAGL
HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
TYLFWEPMSVGREFGHTIENCRQLQGAIDVAGMAIPLEMMVDIDHGDVTSSNPADIDPYA
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCCCCCHH
WAEAFPTKSPIIHIKQSSMNKGGHWPFTSTYNKDGRITPEKLLDTVRRGGGTDNEICLEL
HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEE
SFREREPVDHQVVAMIRESVDYWAPFIETGRSDLLLKAE
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA