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The map label for this gene is wcaJ [H]

Identifier: 13475646

GI number: 13475646

Start: 5565996

End: 5566613

Strand: Direct

Name: wcaJ [H]

Synonym: mlr6766

Alternate gene names: 13475646

Gene position: 5565996-5566613 (Clockwise)

Preceding gene: 13475645

Following gene: 13475647

Centisome position: 79.11

GC content: 62.3

Gene sequence:

>618_bases
TTGGCAAGACGCATGATCGATCTCGCGGTCGCGGGCGCCGCGACCCTCGTATTTGCACCGCTGATGCTTTTGATCGCCGG
AGCGCTTCTGCTCGAAGGCGGTGGCTCGATCCTGTTCACACAGACCCGCATGGGCGTTGGTGGCCGACCCTTCCGCATGT
ACAAATTTCGCAAGTTCGGTGTGAACTGCGGTTCCCAAGGCCTCGCACTGACCGTCGTCGGCGACAGCCGCATGACGATG
GTGGGCCGGTTCCTCGCGGCAACAAAGTTCGACGAACTGCCGCAGCTGTGGAACGTCCTAAAAGGCGAGATGGCGATTGT
CGGGCCGCGACCCGAGAGCATGGCTTTCGCGGATTGTTTCCGGGGCGGCCTCGAGGCCGTCCTGCAATACAAGCCCGGCC
TGCTGGGGCCAACCCAGGTTCTCTTCCGGCACGAGGCGCATTTCTTCCCCCGATCGGCCGATCCGATCCTGTTTTATCGG
GAGGTTATGTTCCCCGCCAAAGCCAGGCTCGACCTCTCCTACTATCCGCAGCGCACCATCGTCTCCGACATCGTATGGAT
GGCGCGTGGCGTCCTGGCGGTTGTCGGCTGGGTTCCATCGCAGCCGATCGACGTATGA

Upstream 100 bases:

>100_bases
TCGCAAGCGCACTCAACGGCGACGCCCAAACAGGAACTGCCGCATGAACGCGTTGGATATTTCCCTTCAGCGGCGCTTCG
TCTCAAGCCCCGCTCACGGC

Downstream 100 bases:

>100_bases
ATCCCAAAAGGAAAGCGATCCAGTAAACCAAGGGAATGCGCAGTCATGAGCTATAGTGGCAAGAAAGTTCTGGTGACGGG
CGCGGATGGATTTATCGGTT

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MARRMIDLAVAGAATLVFAPLMLLIAGALLLEGGGSILFTQTRMGVGGRPFRMYKFRKFGVNCGSQGLALTVVGDSRMTM
VGRFLAATKFDELPQLWNVLKGEMAIVGPRPESMAFADCFRGGLEAVLQYKPGLLGPTQVLFRHEAHFFPRSADPILFYR
EVMFPAKARLDLSYYPQRTIVSDIVWMARGVLAVVGWVPSQPIDV

Sequences:

>Translated_205_residues
MARRMIDLAVAGAATLVFAPLMLLIAGALLLEGGGSILFTQTRMGVGGRPFRMYKFRKFGVNCGSQGLALTVVGDSRMTM
VGRFLAATKFDELPQLWNVLKGEMAIVGPRPESMAFADCFRGGLEAVLQYKPGLLGPTQVLFRHEAHFFPRSADPILFYR
EVMFPAKARLDLSYYPQRTIVSDIVWMARGVLAVVGWVPSQPIDV
>Mature_204_residues
ARRMIDLAVAGAATLVFAPLMLLIAGALLLEGGGSILFTQTRMGVGGRPFRMYKFRKFGVNCGSQGLALTVVGDSRMTMV
GRFLAATKFDELPQLWNVLKGEMAIVGPRPESMAFADCFRGGLEAVLQYKPGLLGPTQVLFRHEAHFFPRSADPILFYRE
VMFPAKARLDLSYYPQRTIVSDIVWMARGVLAVVGWVPSQPIDV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=143, Percent_Identity=37.0629370629371, Blast_Score=100, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475
- InterPro:   IPR017473 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 22558; Mature: 22427

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRMIDLAVAGAATLVFAPLMLLIAGALLLEGGGSILFTQTRMGVGGRPFRMYKFRKFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHC
VNCGSQGLALTVVGDSRMTMVGRFLAATKFDELPQLWNVLKGEMAIVGPRPESMAFADCF
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
RGGLEAVLQYKPGLLGPTQVLFRHEAHFFPRSADPILFYREVMFPAKARLDLSYYPQRTI
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCCHHCCCHHH
VSDIVWMARGVLAVVGWVPSQPIDV
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ARRMIDLAVAGAATLVFAPLMLLIAGALLLEGGGSILFTQTRMGVGGRPFRMYKFRKFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHC
VNCGSQGLALTVVGDSRMTMVGRFLAATKFDELPQLWNVLKGEMAIVGPRPESMAFADCF
CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
RGGLEAVLQYKPGLLGPTQVLFRHEAHFFPRSADPILFYREVMFPAKARLDLSYYPQRTI
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHCCCCHHCCCHHH
VSDIVWMARGVLAVVGWVPSQPIDV
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8759852; 9097040; 9278503 [H]