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The map label for this gene is arnB [H]

Identifier: 13475645

GI number: 13475645

Start: 5564806

End: 5565942

Strand: Direct

Name: arnB [H]

Synonym: mlr6765

Alternate gene names: 13475645

Gene position: 5564806-5565942 (Clockwise)

Preceding gene: 13475644

Following gene: 13475646

Centisome position: 79.09

GC content: 62.97

Gene sequence:

>1137_bases
ATGCTCTTGGTGAGCGCCCCGATCCTAGGCGTGCCGGAGAAGGCAGCCCTGTCAAAGGTGATTGACAGCGGCTGGCTTAC
CATGGGGGAGCGGGTGCGCGCATTCGAGTTGGCCTTTGCCGACATGCATGGCGCGCAGGACTGCGTGGCGGTCGGTTCCT
GCACCGCGGCGCTCCACCTCATCCTGCATGCGCTGGGAATAGGCCCTGGCGACGAAGTACTGGTCCCGTCGCTGACCTTC
GTGGCGACCGCGAATGCGGTGCTCTATGTCGGGGCGACTCCGGTCTTTGTCGATATCGAGTCGGTCGACGTGCCGTTAAT
GTCGCTCGCGGAAGCCGAAGCGCGGTGCACATCACGCACAAAGGCGGTCATCCTCGTTCACTTCGCGGGCTATCTCGCCA
ATCGGGAACAATGGCAGCGGTTCGCCCGGGTTCGAGGGCTCCACATCATCGAGGACGCTGCGCATGCGCCCGGCCTGAGG
GAAGTGGGGACGTTCGGCACTGCGGCCGCCTTCAGCTTCTACGGCAACAAGAACATGACAACAGCGGAAGGGGGCGCCGT
GATCGCCCGTGACTCCGATCTGCTCGACAAAATCCGCCAGGCCCGCGGGCATGGGATGACCAGCGGGACCCATCAGCGGC
TGAACAGCCGTACCCCGCAATATGATGTCACCATGCTCGGGTTCAACTACCGCATGGACGAGATGCGGGCGGCGATTGGG
CTGGTCCAGCTGCAGAACCTGCAAGAGTGGAACGAGATCAGGCGTATCCTGGCCGTCCTGTACCGGCGCCTCATCGCCGA
ACATTGCCCGGCCGTGACCATTCCATTCAGCGAACCCAGGACGTCGGCTCACCACATCATGCCGGTCCTCCTGCCGCGCT
ACGCGAGGCGGCAGGCGGTTATCGACGAACTGCGGACGCAGGGGATACAGACCACGATTCATTATCCGCCGGTGCACCAG
ATGACGTTCTATCGCGAGCGTTACCCCGGCGTTGCCTTGCCGCGTACAGAGGACTTTGCTCAGCGAGAACTGACAATCCC
ATTGCACCCCCAGATCACTTCACCTGTCGCCGAAGCGGTTGTGGCTGCACTCGCAAGCGCACTCAACGGCGACGCCCAAA
CAGGAACTGCCGCATGA

Upstream 100 bases:

>100_bases
GCCTGGGAAGAGCAGTCGACCTCGATCGAGGTCGCGGCCGCGGCCGCATGAAAATCCGGATGTAGAGGCCGAACCACAAT
AAGGATTTCAGGAGGTCAAG

Downstream 100 bases:

>100_bases
ACGCGTTGGATATTTCCCTTCAGCGGCGCTTCGTCTCAAGCCCCGCTCACGGCTTGGCAAGACGCATGATCGATCTCGCG
GTCGCGGGCGCCGCGACCCT

Product: spore coat polysaccharide biosynthesis protein SPSC

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLLVSAPILGVPEKAALSKVIDSGWLTMGERVRAFELAFADMHGAQDCVAVGSCTAALHLILHALGIGPGDEVLVPSLTF
VATANAVLYVGATPVFVDIESVDVPLMSLAEAEARCTSRTKAVILVHFAGYLANREQWQRFARVRGLHIIEDAAHAPGLR
EVGTFGTAAAFSFYGNKNMTTAEGGAVIARDSDLLDKIRQARGHGMTSGTHQRLNSRTPQYDVTMLGFNYRMDEMRAAIG
LVQLQNLQEWNEIRRILAVLYRRLIAEHCPAVTIPFSEPRTSAHHIMPVLLPRYARRQAVIDELRTQGIQTTIHYPPVHQ
MTFYRERYPGVALPRTEDFAQRELTIPLHPQITSPVAEAVVAALASALNGDAQTGTAA

Sequences:

>Translated_378_residues
MLLVSAPILGVPEKAALSKVIDSGWLTMGERVRAFELAFADMHGAQDCVAVGSCTAALHLILHALGIGPGDEVLVPSLTF
VATANAVLYVGATPVFVDIESVDVPLMSLAEAEARCTSRTKAVILVHFAGYLANREQWQRFARVRGLHIIEDAAHAPGLR
EVGTFGTAAAFSFYGNKNMTTAEGGAVIARDSDLLDKIRQARGHGMTSGTHQRLNSRTPQYDVTMLGFNYRMDEMRAAIG
LVQLQNLQEWNEIRRILAVLYRRLIAEHCPAVTIPFSEPRTSAHHIMPVLLPRYARRQAVIDELRTQGIQTTIHYPPVHQ
MTFYRERYPGVALPRTEDFAQRELTIPLHPQITSPVAEAVVAALASALNGDAQTGTAA
>Mature_378_residues
MLLVSAPILGVPEKAALSKVIDSGWLTMGERVRAFELAFADMHGAQDCVAVGSCTAALHLILHALGIGPGDEVLVPSLTF
VATANAVLYVGATPVFVDIESVDVPLMSLAEAEARCTSRTKAVILVHFAGYLANREQWQRFARVRGLHIIEDAAHAPGLR
EVGTFGTAAAFSFYGNKNMTTAEGGAVIARDSDLLDKIRQARGHGMTSGTHQRLNSRTPQYDVTMLGFNYRMDEMRAAIG
LVQLQNLQEWNEIRRILAVLYRRLIAEHCPAVTIPFSEPRTSAHHIMPVLLPRYARRQAVIDELRTQGIQTTIHYPPVHQ
MTFYRERYPGVALPRTEDFAQRELTIPLHPQITSPVAEAVVAALASALNGDAQTGTAA

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=373, Percent_Identity=37.5335120643432, Blast_Score=228, Evalue=4e-61,
Organism=Escherichia coli, GI2367285, Length=347, Percent_Identity=31.1239193083574, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41292; Mature: 41292

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVSAPILGVPEKAALSKVIDSGWLTMGERVRAFELAFADMHGAQDCVAVGSCTAALHL
CEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILHALGIGPGDEVLVPSLTFVATANAVLYVGATPVFVDIESVDVPLMSLAEAEARCTSRT
HHHHHCCCCCCCEECCCHHEEEECCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCC
KAVILVHFAGYLANREQWQRFARVRGLHIIEDAAHAPGLREVGTFGTAAAFSFYGNKNMT
CEEEEEEHHHHHCCHHHHHHHHHHCCCCEEHHHHCCCCCHHHCCCCHHHHHEEECCCCCE
TAEGGAVIARDSDLLDKIRQARGHGMTSGTHQRLNSRTPQYDVTMLGFNYRMDEMRAAIG
ECCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH
LVQLQNLQEWNEIRRILAVLYRRLIAEHCPAVTIPFSEPRTSAHHIMPVLLPRYARRQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
IDELRTQGIQTTIHYPPVHQMTFYRERYPGVALPRTEDFAQRELTIPLHPQITSPVAEAV
HHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHCEEECCCCCCCCCHHHHHH
VAALASALNGDAQTGTAA
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLLVSAPILGVPEKAALSKVIDSGWLTMGERVRAFELAFADMHGAQDCVAVGSCTAALHL
CEEEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
ILHALGIGPGDEVLVPSLTFVATANAVLYVGATPVFVDIESVDVPLMSLAEAEARCTSRT
HHHHHCCCCCCCEECCCHHEEEECCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHCCC
KAVILVHFAGYLANREQWQRFARVRGLHIIEDAAHAPGLREVGTFGTAAAFSFYGNKNMT
CEEEEEEHHHHHCCHHHHHHHHHHCCCCEEHHHHCCCCCHHHCCCCHHHHHEEECCCCCE
TAEGGAVIARDSDLLDKIRQARGHGMTSGTHQRLNSRTPQYDVTMLGFNYRMDEMRAAIG
ECCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHH
LVQLQNLQEWNEIRRILAVLYRRLIAEHCPAVTIPFSEPRTSAHHIMPVLLPRYARRQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
IDELRTQGIQTTIHYPPVHQMTFYRERYPGVALPRTEDFAQRELTIPLHPQITSPVAEAV
HHHHHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHCEEECCCCCCCCCHHHHHH
VAALASALNGDAQTGTAA
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA