| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475401
Identifier: 13475401
GI number: 13475401
Start: 5276974
End: 5277546
Strand: Direct
Name: 13475401
Synonym: mlr6458
Alternate gene names: NA
Gene position: 5276974-5277546 (Clockwise)
Preceding gene: 13475394
Following gene: 13475410
Centisome position: 75.0
GC content: 62.65
Gene sequence:
>573_bases GTGATGGCCATGGGGCGCTCAAGCCTTGTGAATGGGGCGCGACGTGGCTTCCCACGCGCCGCCAATGTCGGCAAGGCGGG CCTCGATGCATTCGACATCGAGCATGATGGTGCCGCCGCCCGAAAAGATGAGTTCGACGATGCCGGCTGGCTTGCTGATC TCGATGAAGCTGATCGCCAGCAGGGACAGCACCTCGGCCGGCTTGTCGCGGGCAATGCCATTGGTTTTGGCGCCCAGCAC CCGGTCGAAATGCAGCACGGCCTGCCGCCGCTCATTGTGCTGGCGGAACAGGCCCGACTTCGCCTCCCAGACGAAACGGT TCATGGTCAGCACGAAACGCTTGGCCGCAGGCAGGAATTCGAGGTCCGACACCTTCATCACGGCGTCCTGGACATGGGCC GAGACGATGCTCAGATCCTGGTCGTCGAGCGCGATAAGCTTGAGGGCCATGCGGAATTTGTACCTAAGGTTGGTTTCAGC CCTCTGTTAGGCGGTCTTTCCGGCCGGTGCAACCGCGACACGACTCCCGCCCGAGGCAATTGCCTCGGCTTTGCGGTGCT GGCAGGTGGATGA
Upstream 100 bases:
>100_bases GATCTGGCGAACCCCTGCGTCGACGTCCTCGGACACTTCCCTCTTGGTCGTCAGGAAAGCGGCGAAGCGCTGCTCGAAAT CGGCATCGGACTGGCGAAGC
Downstream 100 bases:
>100_bases AGGCCGCACGGGCAGCCTCCGTTCGAAGCTGCCGCCGTTCGATCGTCAGGCGGAAATGCGCTCGATCACCGCGCCGCAGT TGGACAGTTTTTCCTCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MMAMGRSSLVNGARRGFPRAANVGKAGLDAFDIEHDGAAARKDEFDDAGWLADLDEADRQQGQHLGRLVAGNAIGFGAQH PVEMQHGLPPLIVLAEQARLRLPDETVHGQHETLGRRQEFEVRHLHHGVLDMGRDDAQILVVERDKLEGHAEFVPKVGFS PLLGGLSGRCNRDTTPARGNCLGFAVLAGG
Sequences:
>Translated_190_residues MMAMGRSSLVNGARRGFPRAANVGKAGLDAFDIEHDGAAARKDEFDDAGWLADLDEADRQQGQHLGRLVAGNAIGFGAQH PVEMQHGLPPLIVLAEQARLRLPDETVHGQHETLGRRQEFEVRHLHHGVLDMGRDDAQILVVERDKLEGHAEFVPKVGFS PLLGGLSGRCNRDTTPARGNCLGFAVLAGG >Mature_190_residues MMAMGRSSLVNGARRGFPRAANVGKAGLDAFDIEHDGAAARKDEFDDAGWLADLDEADRQQGQHLGRLVAGNAIGFGAQH PVEMQHGLPPLIVLAEQARLRLPDETVHGQHETLGRRQEFEVRHLHHGVLDMGRDDAQILVVERDKLEGHAEFVPKVGFS PLLGGLSGRCNRDTTPARGNCLGFAVLAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20477; Mature: 20477
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMGRSSLVNGARRGFPRAANVGKAGLDAFDIEHDGAAARKDEFDDAGWLADLDEADRQ CCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH QGQHLGRLVAGNAIGFGAQHPVEMQHGLPPLIVLAEQARLRLPDETVHGQHETLGRRQEF HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCCCCHHHCCCHHHHCCHHHH EVRHLHHGVLDMGRDDAQILVVERDKLEGHAEFVPKVGFSPLLGGLSGRCNRDTTPARGN HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC CLGFAVLAGG EEEEEEEECC >Mature Secondary Structure MMAMGRSSLVNGARRGFPRAANVGKAGLDAFDIEHDGAAARKDEFDDAGWLADLDEADRQ CCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHH QGQHLGRLVAGNAIGFGAQHPVEMQHGLPPLIVLAEQARLRLPDETVHGQHETLGRRQEF HHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEECHHHCCCCCHHHCCCHHHHCCHHHH EVRHLHHGVLDMGRDDAQILVVERDKLEGHAEFVPKVGFSPLLGGLSGRCNRDTTPARGN HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCC CLGFAVLAGG EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA