| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475410
Identifier: 13475410
GI number: 13475410
Start: 5284474
End: 5285010
Strand: Direct
Name: 13475410
Synonym: mlr6471
Alternate gene names: NA
Gene position: 5284474-5285010 (Clockwise)
Preceding gene: 13475401
Following gene: 13475420
Centisome position: 75.11
GC content: 60.15
Gene sequence:
>537_bases ATGAAGCGCAGGCCACTACTACTCTTCGCTTTTCCGGCTTTCATCCTGGTGGTTTTGGCCTGCGAGCGAATGGCGACCAT GCTGCTCGGGAGCTATCCCGCCAGCCCCGCAGTGTGGAGAATCTGGTTTGAACTGCGCCCCTTGTCGGCGATGTTCTGGC AACAGATCGACCCATATCTCTACGGTTCGATGGCCCTGGATGCCGTCATCCTGGTTGCGGCGGCATGGGTGTTCTGGAGC GCTTGCCGTGTGAGACCGGCGGCCGCCTTCTTCCTGGCCAACCACGTCGCCCTGCTCTTTGCCGGACTGATGATCGCTTC CAGCAGTCATTCGGAGACAGCGAGCACGGTCGCGGCTTTTCCGATGTCCAACGGTCTCCAATTCGCCCTGAAGATCGATT TTACTTGGCAGAACAGCCTGGTGCTCGTTCTGGGCTTCGCGGCCTGCGCGTACTGTCATGTCGCGTTCCTTCGCGAGACG CGACTGCGCACAGAGTCTCTGGCCCTGCGCCTCACGACTTTGGGACGGGATCTTTAG
Upstream 100 bases:
>100_bases CCGCCCGGATGAACTGCCAAGCACGGCCATAGTGGCGCCCTTGCGTTAAGCCTCGCGCAATCTCTGCAATCTATGCTGAT GCCAGATTGTCGAGGTTAAA
Downstream 100 bases:
>100_bases TCGGGCGCACCGGGCTTCACCGGAACGCGACATGCCTCAATTGATCTTGCGATAATAGACCTTGCCGTCCGGCGTCTCCG TTCGCTGGTAGGCCGGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKRRPLLLFAFPAFILVVLACERMATMLLGSYPASPAVWRIWFELRPLSAMFWQQIDPYLYGSMALDAVILVAAAWVFWS ACRVRPAAAFFLANHVALLFAGLMIASSSHSETASTVAAFPMSNGLQFALKIDFTWQNSLVLVLGFAACAYCHVAFLRET RLRTESLALRLTTLGRDL
Sequences:
>Translated_178_residues MKRRPLLLFAFPAFILVVLACERMATMLLGSYPASPAVWRIWFELRPLSAMFWQQIDPYLYGSMALDAVILVAAAWVFWS ACRVRPAAAFFLANHVALLFAGLMIASSSHSETASTVAAFPMSNGLQFALKIDFTWQNSLVLVLGFAACAYCHVAFLRET RLRTESLALRLTTLGRDL >Mature_178_residues MKRRPLLLFAFPAFILVVLACERMATMLLGSYPASPAVWRIWFELRPLSAMFWQQIDPYLYGSMALDAVILVAAAWVFWS ACRVRPAAAFFLANHVALLFAGLMIASSSHSETASTVAAFPMSNGLQFALKIDFTWQNSLVLVLGFAACAYCHVAFLRET RLRTESLALRLTTLGRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19841; Mature: 19841
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRPLLLFAFPAFILVVLACERMATMLLGSYPASPAVWRIWFELRPLSAMFWQQIDPYL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEHHHCHHHHHHHHHCCHHH YGSMALDAVILVAAAWVFWSACRVRPAAAFFLANHVALLFAGLMIASSSHSETASTVAAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEC PMSNGLQFALKIDFTWQNSLVLVLGFAACAYCHVAFLRETRLRTESLALRLTTLGRDL CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRRPLLLFAFPAFILVVLACERMATMLLGSYPASPAVWRIWFELRPLSAMFWQQIDPYL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEHHHCHHHHHHHHHCCHHH YGSMALDAVILVAAAWVFWSACRVRPAAAFFLANHVALLFAGLMIASSSHSETASTVAAF HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEC PMSNGLQFALKIDFTWQNSLVLVLGFAACAYCHVAFLRETRLRTESLALRLTTLGRDL CCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA