| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475363
Identifier: 13475363
GI number: 13475363
Start: 5232728
End: 5233267
Strand: Reverse
Name: 13475363
Synonym: mll6410
Alternate gene names: NA
Gene position: 5233267-5232728 (Counterclockwise)
Preceding gene: 13475372
Following gene: 13475361
Centisome position: 74.38
GC content: 59.07
Gene sequence:
>540_bases GTGCAATCAGAAGGTGGCGATTTGAACAAGGAAACGCAGCACGGGCCAACCCGCTCATGGACAAGTGCGGCTTTCTCGCG CCAGGCCGGCACAGAGGCGATTCCGGGCGAGGTCATGAAGCTTGCCCATCGGGAAAAGCTGGAGCTCTGCTTCTCGCTGG AAAGCATTGCCGATGCACTGCCGAACGTCGACCGCCTCAAATGTCTTGGAACGGCCAAGAAGATCGTTCCGCTGCTCCGT GACATTCATGGGTTTGAGGAGAGGGTGATTTTCCCTGCGTATGAGGCGCACTTGACCCCGGCCGAGGCCAAACTTGCCTC TACCAGCCGGTTGCGCATCGAGCACCTTGAGGATCAATGCTTCGCTGGCGAGGTGGCCGAAACGCTCCTAGCGATCGGTC ATGGTGATCCGATAGAGAGCGCGGAAGCTGTCGGATTCATGCTACGCGGCTTCTTCGAAGGCTTGCGGCGACACATCGCT TTCGAACGCGAGCATGTCCTGCCGCGGATCGTAATAAGCGACGAAGGCCCCGACGCTTAG
Upstream 100 bases:
>100_bases CGGACGCCAAATCCGCGGTGCATTAATTCCGTAGTTGCCGCCTGCTCGCCCTGATCCATGTCAGAGCCGCACGATTTTGC TTCGGGCAGCATCGAGTTCG
Downstream 100 bases:
>100_bases GTCTCATTCAAAGGCCGGTTGCCGCGCGCCTCGGCCGCCGCAGCGCTGCTCCAGCCGGCTCATGCTGTCGACCGTTACAT GGCGTTTGTTCTCGATCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MQSEGGDLNKETQHGPTRSWTSAAFSRQAGTEAIPGEVMKLAHREKLELCFSLESIADALPNVDRLKCLGTAKKIVPLLR DIHGFEERVIFPAYEAHLTPAEAKLASTSRLRIEHLEDQCFAGEVAETLLAIGHGDPIESAEAVGFMLRGFFEGLRRHIA FEREHVLPRIVISDEGPDA
Sequences:
>Translated_179_residues MQSEGGDLNKETQHGPTRSWTSAAFSRQAGTEAIPGEVMKLAHREKLELCFSLESIADALPNVDRLKCLGTAKKIVPLLR DIHGFEERVIFPAYEAHLTPAEAKLASTSRLRIEHLEDQCFAGEVAETLLAIGHGDPIESAEAVGFMLRGFFEGLRRHIA FEREHVLPRIVISDEGPDA >Mature_179_residues MQSEGGDLNKETQHGPTRSWTSAAFSRQAGTEAIPGEVMKLAHREKLELCFSLESIADALPNVDRLKCLGTAKKIVPLLR DIHGFEERVIFPAYEAHLTPAEAKLASTSRLRIEHLEDQCFAGEVAETLLAIGHGDPIESAEAVGFMLRGFFEGLRRHIA FEREHVLPRIVISDEGPDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19755; Mature: 19755
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSEGGDLNKETQHGPTRSWTSAAFSRQAGTEAIPGEVMKLAHREKLELCFSLESIADAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PNVDRLKCLGTAKKIVPLLRDIHGFEERVIFPAYEAHLTPAEAKLASTSRLRIEHLEDQC CCHHHHHHHHHHHHHHHHHHHHHCHHHCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHH FAGEVAETLLAIGHGDPIESAEAVGFMLRGFFEGLRRHIAFEREHVLPRIVISDEGPDA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC >Mature Secondary Structure MQSEGGDLNKETQHGPTRSWTSAAFSRQAGTEAIPGEVMKLAHREKLELCFSLESIADAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PNVDRLKCLGTAKKIVPLLRDIHGFEERVIFPAYEAHLTPAEAKLASTSRLRIEHLEDQC CCHHHHHHHHHHHHHHHHHHHHHCHHHCEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHH FAGEVAETLLAIGHGDPIESAEAVGFMLRGFFEGLRRHIAFEREHVLPRIVISDEGPDA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA