| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is glnT [H]
Identifier: 13475188
GI number: 13475188
Start: 5029165
End: 5030562
Strand: Direct
Name: glnT [H]
Synonym: mlr6210
Alternate gene names: 13475188
Gene position: 5029165-5030562 (Clockwise)
Preceding gene: 13475187
Following gene: 13475192
Centisome position: 71.48
GC content: 57.44
Gene sequence:
>1398_bases ATGCATCTCCCAAACGCGTGGACTGGCGCACTGCCAGCCCGGAGCCTTGCGACACCTAAGGAGTTAGACGTCGCAGGGGC TCAAGCTTTCCTGGAGCAGGCGGACGTCCGCTATGTACTCGCGCAATTCGTCGACCTATATGGGGTCGCGAAGAGCAAAG CCGTTCCGGTGCAACATCTTGATTGCCTTTTGACGGAAGGCGCGGGTTTTGCTGGCGGCGCCCCGTGCGGGCTTGGCCTC CTTCCTCATGAAGCGGAATATATGGTGGTCTGCGAACTTGATACATTGACGGTGACGCCATGGGCTCCCGGATACGCTCG CATGCTAGGAGTCGGTACCGTTAAGGGGGCGCCGCATCCGGTCGACACGCGTAACGTTCTCAAGACGCAAGTCGCGTCCC TTGCTGAGCGCGACTGGACGCTCAATACGGGGCTGGAGCCCGAGTTCCTTCTGCTGCGGCGGGAGCCAGACGGGAAACTA TCGCCGTTCGACCGCACGGATACGCTCACCAAGCCCGCTTATGATTATCGCGGCCTCATGCGCGGGCGAAACGTCCTTGA GCGCGTAACGGAATGCTTACAGGCCGTTGGAATCGATGTCTATCAGATTGACCATGAAGACGCGAACGGACAGTACGAAA TCAACTTCAAGTACGCCGATGCACTAAAGACGGCTGACCAGATCGTCTTCTTTAAAATGGCGGTCTCGGAAATCGCGCAT GATCTCGGCGCCATCTGCTCCTTTATGCCAAAGCCGCGCAGTAGTTCGACCGGCAATGGCATGCATATCCATTGTTCTAT CGCCGACGGGGACGGGCGGAATCTCTTTCACGATGACGCTGACCCGAACGGAATGGGCTTGAGCAAGCTCGCCTATCATT TCCTGGGCGGTGTGCTCGCGCATGCGAAGGGGCTAACAGCGCTTCTGGCGCCAACCGTGAACTCCTACAAGCGGCTGGTC GTCGGTGGCACTGTCTCAGGCGCAACGTGGGCTCCTGCCTGCATCGTTTACGGCTACAACAATCGCACTGCCATGGTGCG AATTCCCTACGGCAGGCTTGAGATTCGCACTGGCGACAGCAGCATGAATCCGTACCTCGCAACGGCCGCGCTTATTGCTG CCGGTCTCGATGGAATTGAGCAGAAGCTCGAGCCAGGTGCACCCAGAAATGTTAACTTCTACGGTCTCACGCTCGAGGCA ATCAAGGAGATGGGCGTAGATCTGCTTCCGCAGACGCTAACCGAAGCGCTCGATGCATTAGAGGCTGATCAGTTGTTTGC TGGCACTCTCGGGAAGCCTGTCATCGAACAGTTCCTATCCCTGAAGAGATCAGAGTGGCTGGAATACCACTGCCACGTGT CGGACTGGGAAGTTGAAAGGTACCTCAATTTCTTCTGA
Upstream 100 bases:
>100_bases AGGTGCGACCTCTTGCGGGCGCTATTCCGGTCATGCCCCCAATAGGCAACTCGCCAGACACAGGGCAACATAGCGAAAGT CAACCAAAGGAGAAATCCGA
Downstream 100 bases:
>100_bases ACTCAGCCGTCGTCGGCCGACCTGCGAAATTGACCCCGCATTCCTAGTGTCGCTTGACGCTTTCGGATCTCGGCCATGAG GTTCCGCTGATCAGCCCTAC
Product: glutamine synthetase III
Products: NA
Alternate protein names: Glutamate--ammonia ligase; Glutamine synthetase III; GSIII [H]
Number of amino acids: Translated: 465; Mature: 465
Protein sequence:
>465_residues MHLPNAWTGALPARSLATPKELDVAGAQAFLEQADVRYVLAQFVDLYGVAKSKAVPVQHLDCLLTEGAGFAGGAPCGLGL LPHEAEYMVVCELDTLTVTPWAPGYARMLGVGTVKGAPHPVDTRNVLKTQVASLAERDWTLNTGLEPEFLLLRREPDGKL SPFDRTDTLTKPAYDYRGLMRGRNVLERVTECLQAVGIDVYQIDHEDANGQYEINFKYADALKTADQIVFFKMAVSEIAH DLGAICSFMPKPRSSSTGNGMHIHCSIADGDGRNLFHDDADPNGMGLSKLAYHFLGGVLAHAKGLTALLAPTVNSYKRLV VGGTVSGATWAPACIVYGYNNRTAMVRIPYGRLEIRTGDSSMNPYLATAALIAAGLDGIEQKLEPGAPRNVNFYGLTLEA IKEMGVDLLPQTLTEALDALEADQLFAGTLGKPVIEQFLSLKRSEWLEYHCHVSDWEVERYLNFF
Sequences:
>Translated_465_residues MHLPNAWTGALPARSLATPKELDVAGAQAFLEQADVRYVLAQFVDLYGVAKSKAVPVQHLDCLLTEGAGFAGGAPCGLGL LPHEAEYMVVCELDTLTVTPWAPGYARMLGVGTVKGAPHPVDTRNVLKTQVASLAERDWTLNTGLEPEFLLLRREPDGKL SPFDRTDTLTKPAYDYRGLMRGRNVLERVTECLQAVGIDVYQIDHEDANGQYEINFKYADALKTADQIVFFKMAVSEIAH DLGAICSFMPKPRSSSTGNGMHIHCSIADGDGRNLFHDDADPNGMGLSKLAYHFLGGVLAHAKGLTALLAPTVNSYKRLV VGGTVSGATWAPACIVYGYNNRTAMVRIPYGRLEIRTGDSSMNPYLATAALIAAGLDGIEQKLEPGAPRNVNFYGLTLEA IKEMGVDLLPQTLTEALDALEADQLFAGTLGKPVIEQFLSLKRSEWLEYHCHVSDWEVERYLNFF >Mature_465_residues MHLPNAWTGALPARSLATPKELDVAGAQAFLEQADVRYVLAQFVDLYGVAKSKAVPVQHLDCLLTEGAGFAGGAPCGLGL LPHEAEYMVVCELDTLTVTPWAPGYARMLGVGTVKGAPHPVDTRNVLKTQVASLAERDWTLNTGLEPEFLLLRREPDGKL SPFDRTDTLTKPAYDYRGLMRGRNVLERVTECLQAVGIDVYQIDHEDANGQYEINFKYADALKTADQIVFFKMAVSEIAH DLGAICSFMPKPRSSSTGNGMHIHCSIADGDGRNLFHDDADPNGMGLSKLAYHFLGGVLAHAKGLTALLAPTVNSYKRLV VGGTVSGATWAPACIVYGYNNRTAMVRIPYGRLEIRTGDSSMNPYLATAALIAAGLDGIEQKLEPGAPRNVNFYGLTLEA IKEMGVDLLPQTLTEALDALEADQLFAGTLGKPVIEQFLSLKRSEWLEYHCHVSDWEVERYLNFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
Organism=Homo sapiens, GI221307485, Length=438, Percent_Identity=24.8858447488584, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1790301, Length=465, Percent_Identity=29.8924731182796, Blast_Score=174, Evalue=8e-45, Organism=Escherichia coli, GI87081870, Length=459, Percent_Identity=28.5403050108932, Blast_Score=129, Evalue=3e-31,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR017536 [H]
Pfam domain/function: PF00120 Gln-synt_C [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 50688; Mature: 50688
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLPNAWTGALPARSLATPKELDVAGAQAFLEQADVRYVLAQFVDLYGVAKSKAVPVQHL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DCLLTEGAGFAGGAPCGLGLLPHEAEYMVVCELDTLTVTPWAPGYARMLGVGTVKGAPHP HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCHHHHHCCCCCCCCCCC VDTRNVLKTQVASLAERDWTLNTGLEPEFLLLRREPDGKLSPFDRTDTLTKPAYDYRGLM CCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RGRNVLERVTECLQAVGIDVYQIDHEDANGQYEINFKYADALKTADQIVFFKMAVSEIAH HHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DLGAICSFMPKPRSSSTGNGMHIHCSIADGDGRNLFHDDADPNGMGLSKLAYHFLGGVLA HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH HAKGLTALLAPTVNSYKRLVVGGTVSGATWAPACIVYGYNNRTAMVRIPYGRLEIRTGDS HHCCCHHHHHCCHHCCCEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCC SMNPYLATAALIAAGLDGIEQKLEPGAPRNVNFYGLTLEAIKEMGVDLLPQTLTEALDAL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHH EADQLFAGTLGKPVIEQFLSLKRSEWLEYHCHVSDWEVERYLNFF HHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCC >Mature Secondary Structure MHLPNAWTGALPARSLATPKELDVAGAQAFLEQADVRYVLAQFVDLYGVAKSKAVPVQHL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH DCLLTEGAGFAGGAPCGLGLLPHEAEYMVVCELDTLTVTPWAPGYARMLGVGTVKGAPHP HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCCHHHHHCCCCCCCCCCC VDTRNVLKTQVASLAERDWTLNTGLEPEFLLLRREPDGKLSPFDRTDTLTKPAYDYRGLM CCHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH RGRNVLERVTECLQAVGIDVYQIDHEDANGQYEINFKYADALKTADQIVFFKMAVSEIAH HHHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH DLGAICSFMPKPRSSSTGNGMHIHCSIADGDGRNLFHDDADPNGMGLSKLAYHFLGGVLA HHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH HAKGLTALLAPTVNSYKRLVVGGTVSGATWAPACIVYGYNNRTAMVRIPYGRLEIRTGDS HHCCCHHHHHCCHHCCCEEEEECCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEEECCC SMNPYLATAALIAAGLDGIEQKLEPGAPRNVNFYGLTLEAIKEMGVDLLPQTLTEALDAL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHHHH EADQLFAGTLGKPVIEQFLSLKRSEWLEYHCHVSDWEVERYLNFF HHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1356885 [H]