| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475192
Identifier: 13475192
GI number: 13475192
Start: 5033545
End: 5034090
Strand: Direct
Name: 13475192
Synonym: mlr6215
Alternate gene names: NA
Gene position: 5033545-5034090 (Clockwise)
Preceding gene: 13475188
Following gene: 13475193
Centisome position: 71.54
GC content: 56.23
Gene sequence:
>546_bases ATGCTCTCACATCATCCTGAGCGATCTCAGTGGACGGCACCGGTTGCAGACGACGAAGGTCTTACGTCGGCGTGCTGCCA TCCGTTTGATCCATGTTGGTCGCTCTCTGCGGCCCGATCGATCCACTTTGCGACAAGCCGGGCTTTTTCCTTGACCGCGC TCCCGTGTGATGCCCAACGCTGTTACGGTGATTCCTCGATCCTCTACCTTAACACGCAGGCGGCTGTCCTCGACACGGCC TCTATTCGACCTGGGTTCCTGCTGTTTTCCCTTCAGTCCATTGAAGCACAAGCCGAAGGTCTTTTTGGGGCAGTGTTCCT GTCAATCGGCATGATTTTTGCTCGTCCTAGCGGTGAACGGTCGGAACTGCCGACCTGGATGTGGGTGACCTCGAACGAGG ATAAGGAGGCAGAATGTCATGTCTGGGTCAAATCGCAATTTGACTTTGTTGGGACGGAGCGTCTCGGTGCGTCTCAAGGG CCTAACTATGGTTGCACAAAGGGCTGCCGTGTTCGTCTATACCTCGGTTCCGTGGCCTCGCGGTAG
Upstream 100 bases:
>100_bases ATTGTGCGCCTTGCCTCATTGCCGACGCAAGTTTCACCGCCTCTCTCTCTCCACACCGGACACAAGGTATTTCGGTCTTG TCCGGCTTTCCAGGTATCTC
Downstream 100 bases:
>100_bases GGCAAACCCGAATGAAGCCCGCATGACTCGCACGACCCAGCGCGCGTGCAGTTTCACACGTGGGGCGCCTATCTCCGTAG CCAAAAGAAAGTTGGAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MLSHHPERSQWTAPVADDEGLTSACCHPFDPCWSLSAARSIHFATSRAFSLTALPCDAQRCYGDSSILYLNTQAAVLDTA SIRPGFLLFSLQSIEAQAEGLFGAVFLSIGMIFARPSGERSELPTWMWVTSNEDKEAECHVWVKSQFDFVGTERLGASQG PNYGCTKGCRVRLYLGSVASR
Sequences:
>Translated_181_residues MLSHHPERSQWTAPVADDEGLTSACCHPFDPCWSLSAARSIHFATSRAFSLTALPCDAQRCYGDSSILYLNTQAAVLDTA SIRPGFLLFSLQSIEAQAEGLFGAVFLSIGMIFARPSGERSELPTWMWVTSNEDKEAECHVWVKSQFDFVGTERLGASQG PNYGCTKGCRVRLYLGSVASR >Mature_181_residues MLSHHPERSQWTAPVADDEGLTSACCHPFDPCWSLSAARSIHFATSRAFSLTALPCDAQRCYGDSSILYLNTQAAVLDTA SIRPGFLLFSLQSIEAQAEGLFGAVFLSIGMIFARPSGERSELPTWMWVTSNEDKEAECHVWVKSQFDFVGTERLGASQG PNYGCTKGCRVRLYLGSVASR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19832; Mature: 19832
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHHPERSQWTAPVADDEGLTSACCHPFDPCWSLSAARSIHFATSRAFSLTALPCDAQR CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCHHHHCEEEEECCCEEEEEECCCCHHH CYGDSSILYLNTQAAVLDTASIRPGFLLFSLQSIEAQAEGLFGAVFLSIGMIFARPSGER HCCCCEEEEEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCH SELPTWMWVTSNEDKEAECHVWVKSQFDFVGTERLGASQGPNYGCTKGCRVRLYLGSVAS HCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC R C >Mature Secondary Structure MLSHHPERSQWTAPVADDEGLTSACCHPFDPCWSLSAARSIHFATSRAFSLTALPCDAQR CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCHHHHCEEEEECCCEEEEEECCCCHHH CYGDSSILYLNTQAAVLDTASIRPGFLLFSLQSIEAQAEGLFGAVFLSIGMIFARPSGER HCCCCEEEEEECCEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCH SELPTWMWVTSNEDKEAECHVWVKSQFDFVGTERLGASQGPNYGCTKGCRVRLYLGSVAS HCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA