| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475183
Identifier: 13475183
GI number: 13475183
Start: 5021381
End: 5022898
Strand: Direct
Name: 13475183
Synonym: mlr6204
Alternate gene names: NA
Gene position: 5021381-5022898 (Clockwise)
Preceding gene: 13475182
Following gene: 13475187
Centisome position: 71.37
GC content: 55.86
Gene sequence:
>1518_bases GTGGGGGACGCCGAAGAAGTCGAACGAGGACGCCGATCCCAACCAAGAGCTGCTGAGGTTCGCATGAAGTTCGAGACCAA GATCTTCGATGAACCGCTTCTCGAGTTTGGAAACCAACACTACCATCCCGATCCGCGCCTCGGTCTGTTCGAGGCTGGGC CGCTCCAGACGCCGCTTGGTGATGTCATCAACATTGCTGTCGTAGGGAGTGCGAAGACCGTCAAGGACTCTCGCGACTTC CTTCAAGCCGCTGCGGTCGGATTCGCAGGAAAATCGGAAAAGCATCCAAACCTGCATCCGCCGTTTCCGGGCCTCGGAAA TCAGAACCCTTTCCGCTGCCGGTTCGAGATTCCGGATGGCGCGGTTACCGCGATCCCCCAGGCGCGCATTGAACGTATCA GGAAAGAACCCCATCACGGCAAAGCAGTCGAGATGGCGGTCGATGAAATCATTGAGCAGCTACAGACGATCGATGAGGGC AGCTCACGGCCGGATGTCGCCATCATTGCGCTACCGGTTGAGCTGATCGAGCGCGTTTGGAACGCCAAAGTCGATTCTGA CGCGACGTTGGAGGAGGAAGATAGCTCGGGCTCTGATGCCCCCAATTTCCGCGGCATGCTGAAAGCCAAGGCGATGCACT TTCGCTTTCCCATTCAGATCGTCTGGGAAGACGTGCTCGACGAGCGTGCTGTTATCCCTCTGAAGATCAAAGAGAGCAGC GCCCGACAAATTCAGGATCAAGCCAGCCGTACCTGGAATCTCCTAACCACCCTTTACTACAAAGGGTCTGGGCGTGTGCC GTGGCGGCGAGCGCCTCAAGAGGGAGAGTTTTCGGCCTGCTACATCGGGGTGAGCTTTTATCGCGAGGCCGGTGGACAAC AGCTCTTCACGAGCGCAGCTCAGATGTTCGATGAGCGCGGAAGAGGCTTCATCCTTAAGGGTAAAGGCGCGCAGACGGAA AGTCGTGGCAGGCATCCCTATCTGACGCAGGACGATGCGAAGACTCTGATTGCCGATGCTCTCGCCGCCTACAAAAAGCA TCACATGAATTATCCGGCGCGGGTCATAGTGCTGAAAACATCGCGCTTTCGCGACGAAGAAGCCGACGGGATTTTTGAAG CGCTTGATGAGGTCGGCACCGAACTGCGCGATCTCGTGTGGGTTCAGGAATCGTCGTTTGTGAAGGTATTCAGGGACGGC AATTATCCCGTCATGCGCGGCACGTTCGTGAAACTTGACGGGAAAGGCTTGCTCTACACCAACGGCAGCATTCCCTATTA TGGGACATACCCCGGCATGTATGATCCGAAGCCGCTGTTGATCTGCCCCTACAAAACTAGTGATAGCACGGTCGCGCAGA TCGCGAACGAGATCTTCGGTCTAACGAAAATCAACTGGAACTCCACACAGATGAACCAGAAGCTGCCGATCCCCATTCGT GCAGCACGCAAAGTGGGCGAAGTCCTTAAGTACATCACCGATGAGAAGGTGAGTTCCGACTACCGCAGATACATTTGA
Upstream 100 bases:
>100_bases GCAAGGCGGACGATTTGTTCGCTGTTGCCACCGCTGATCCGCGCCTCATGTTCGGCGAGCCTCCAAACGTCAAACTCCCC AAGAAGGTGCCCGAGGACGT
Downstream 100 bases:
>100_bases CCGGAATCTGCCGTTGCCTGCCGCTTCGACAGGCACGAGCTGGGTCTATCTCGTGCTCGACTGTAAGCCGTGGGCGGGTA TTCCTCTTATCCAACGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDF LQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEG SSRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTE SRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDG NYPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR AARKVGEVLKYITDEKVSSDYRRYI
Sequences:
>Translated_505_residues MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDF LQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEG SSRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTE SRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDG NYPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR AARKVGEVLKYITDEKVSSDYRRYI >Mature_504_residues GDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDFL QAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGS SRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESSA RQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTES RGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGN YPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIRA ARKVGEVLKYITDEKVSSDYRRYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56858; Mature: 56727
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLG CCCHHHHHHCCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC DVINIAVVGSAKTVKDSRDFLQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDG CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC AVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGSSRPDVAIIALPVELIERVW CEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH NAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEEECCCH ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAA HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH QMFDERGRGFILKGKGAQTESRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKT HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGNYPVMRGTFVKLDGKGLLYT CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEEEEEECCCEEEEE NGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR CCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHH AARKVGEVLKYITDEKVSSDYRRYI HHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLG CCHHHHHHCCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC DVINIAVVGSAKTVKDSRDFLQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDG CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC AVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGSSRPDVAIIALPVELIERVW CEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH NAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEEECCCH ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAA HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH QMFDERGRGFILKGKGAQTESRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKT HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC SRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGNYPVMRGTFVKLDGKGLLYT CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEEEEEECCCEEEEE NGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR CCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHH AARKVGEVLKYITDEKVSSDYRRYI HHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]