| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475182
Identifier: 13475182
GI number: 13475182
Start: 5020023
End: 5021447
Strand: Direct
Name: 13475182
Synonym: mlr6203
Alternate gene names: NA
Gene position: 5020023-5021447 (Clockwise)
Preceding gene: 13475180
Following gene: 13475183
Centisome position: 71.35
GC content: 57.89
Gene sequence:
>1425_bases GTGATTCAGAGCAATCGCGCGGGCCCTGGTCCTGTGCAAAGCGGGAACAGGGATAAGAATCCCATGGGGTCCGTTCGCAT CCTGTTCTATGATGCACACATGGCAAAAACCATAACTCCGAATCAACTGCTTGGGCAGATTGGCGAGATCGCCGTTCAAT TGCGGTTCCTCACCATGGGCTTTCAGTTCGACGTGCGCTCGCGCCTCGAATCTGGAATCGATGGGATCGCCGAGGTAATG ATCGAAGGTCAGCCAACCGCGCGAATGATCGCGGTGCAGGTGAAAGCGACCGACGCCGGTATCTACGCGGGCGAAGATGC CAGCGGCTTTACCTATCTGCTGCGCAGTGAAGACCTCGCTTACTGGCGCGGGTCGAACCTTCCCATCATCATCGTCCTCT TTCGGAAGAGCGACGAGACCCACTACTGGAAGGAAATTTCAAGCGGCACGGGGCCAGGCGAAAGGCGGCTCACCTTCGAC AAGACGCTGGACGTGCTAGATGCGAGGGCGGTCGATCGGCTCGCGGCCCTTACTATTCCCAAGACAGGCTTCGGCTACTA CGTTCCGCCACTCGGCGGCGGCGAAGAAGCGCTGGTGAACATCCTTCCAGTGCGCCTTCCCGATGAAGTGTTCGTAACAA CAACGCCGTACACGGCAAAGCAGGCGACCGCGATGCTCCTCGACGCCGGGGCGCCTGCGCGCTTTGATTGGGCGATTAAA GGCAGCTCGTTCTGGTCTTTCCACGATCCACGCATTTCGTCGTGCGACCAGATCGTCGATCTGGATCAGGTCGAAGCGAT CGAGGTCGAGCACTTGGCCTTCCATGAAGACCTCGACGAGCGGAACAACTTTGCCTTTCTCCTCAATCAGGCGCTTCGTC ATCAGGTACGAAGCGATCTGGGATGGGACAAGGAAGGACGCCTTTTCCATTTCAGGGCACGAGCCGAAAACGAGTCCCGC GCATTCCACTATCAGTCAGCGAAGAAGAAGGCTGAAGCTGACGTCGTCAACGTCGTTCGCAATAAGACGGACCCGACCCG CGTTGAGTTCGTACGGCACCACGCCTTCGTGCCGAGGTTCGAACTCCTGTACGATCAGTGGTTCTTGGTGATCAACCCGA CTTACTACTTCACCACCAACGGGTTCATTCCGCACTCCTATCCGAGCGCGCTGCTGGCCGGAAAGAAGAGGTTGGACAAA AGTGCATCGCTTCGCGGTCAGGTAATCATGTGGCATCGCTTTCTCACAGAGGAAGAGCGCAAGGCGGACGATTTGTTCGC TGTTGCCACCGCTGATCCGCGCCTCATGTTCGGCGAGCCTCCAAACGTCAAACTCCCCAAGAAGGTGCCCGAGGACGTGT GGGGGACGCCGAAGAAGTCGAACGAGGACGCCGATCCCAACCAAGAGCTGCTGAGGTTCGCATGA
Upstream 100 bases:
>100_bases GGCGGGTGAGGCCGGCTCCCGAAACACGCTTTACGATTGCAGATCCAGCCTAGCCCCATCATCGCCCCAATTGACGCCGC AGCCGGTGCCCCGGGTTTAA
Downstream 100 bases:
>100_bases AGTTCGAGACCAAGATCTTCGATGAACCGCTTCTCGAGTTTGGAAACCAACACTACCATCCCGATCCGCGCCTCGGTCTG TTCGAGGCTGGGCCGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA
Sequences:
>Translated_474_residues MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA >Mature_474_residues MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53504; Mature: 53504
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMG CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHEEEEEEEEC FQFDVRSRLESGIDGIAEVMIEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLA EEECHHHHHHHCHHHHHHHEECCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCEE YWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFDKTLDVLDARAVDRLAALTIP EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECC KTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK CCCCCEECCCCCCCHHHHHEEEEECCCCCEEEEECCCCHHHHEEEEEECCCCCEEEEEEE GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDL CCCEEEECCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC GWDKEGRLFHFRARAENESRAFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRF CCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH ELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDKSASLRGQVIMWHRFLTEEER HHHHHCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHCHHHC KADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA CCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCC >Mature Secondary Structure MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMG CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHEEEEEEEEC FQFDVRSRLESGIDGIAEVMIEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLA EEECHHHHHHHCHHHHHHHEECCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCEE YWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFDKTLDVLDARAVDRLAALTIP EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECC KTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK CCCCCEECCCCCCCHHHHHEEEEECCCCCEEEEECCCCHHHHEEEEEECCCCCEEEEEEE GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDL CCCEEEECCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC GWDKEGRLFHFRARAENESRAFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRF CCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH ELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDKSASLRGQVIMWHRFLTEEER HHHHHCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHCHHHC KADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA CCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA