Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475182

Identifier: 13475182

GI number: 13475182

Start: 5020023

End: 5021447

Strand: Direct

Name: 13475182

Synonym: mlr6203

Alternate gene names: NA

Gene position: 5020023-5021447 (Clockwise)

Preceding gene: 13475180

Following gene: 13475183

Centisome position: 71.35

GC content: 57.89

Gene sequence:

>1425_bases
GTGATTCAGAGCAATCGCGCGGGCCCTGGTCCTGTGCAAAGCGGGAACAGGGATAAGAATCCCATGGGGTCCGTTCGCAT
CCTGTTCTATGATGCACACATGGCAAAAACCATAACTCCGAATCAACTGCTTGGGCAGATTGGCGAGATCGCCGTTCAAT
TGCGGTTCCTCACCATGGGCTTTCAGTTCGACGTGCGCTCGCGCCTCGAATCTGGAATCGATGGGATCGCCGAGGTAATG
ATCGAAGGTCAGCCAACCGCGCGAATGATCGCGGTGCAGGTGAAAGCGACCGACGCCGGTATCTACGCGGGCGAAGATGC
CAGCGGCTTTACCTATCTGCTGCGCAGTGAAGACCTCGCTTACTGGCGCGGGTCGAACCTTCCCATCATCATCGTCCTCT
TTCGGAAGAGCGACGAGACCCACTACTGGAAGGAAATTTCAAGCGGCACGGGGCCAGGCGAAAGGCGGCTCACCTTCGAC
AAGACGCTGGACGTGCTAGATGCGAGGGCGGTCGATCGGCTCGCGGCCCTTACTATTCCCAAGACAGGCTTCGGCTACTA
CGTTCCGCCACTCGGCGGCGGCGAAGAAGCGCTGGTGAACATCCTTCCAGTGCGCCTTCCCGATGAAGTGTTCGTAACAA
CAACGCCGTACACGGCAAAGCAGGCGACCGCGATGCTCCTCGACGCCGGGGCGCCTGCGCGCTTTGATTGGGCGATTAAA
GGCAGCTCGTTCTGGTCTTTCCACGATCCACGCATTTCGTCGTGCGACCAGATCGTCGATCTGGATCAGGTCGAAGCGAT
CGAGGTCGAGCACTTGGCCTTCCATGAAGACCTCGACGAGCGGAACAACTTTGCCTTTCTCCTCAATCAGGCGCTTCGTC
ATCAGGTACGAAGCGATCTGGGATGGGACAAGGAAGGACGCCTTTTCCATTTCAGGGCACGAGCCGAAAACGAGTCCCGC
GCATTCCACTATCAGTCAGCGAAGAAGAAGGCTGAAGCTGACGTCGTCAACGTCGTTCGCAATAAGACGGACCCGACCCG
CGTTGAGTTCGTACGGCACCACGCCTTCGTGCCGAGGTTCGAACTCCTGTACGATCAGTGGTTCTTGGTGATCAACCCGA
CTTACTACTTCACCACCAACGGGTTCATTCCGCACTCCTATCCGAGCGCGCTGCTGGCCGGAAAGAAGAGGTTGGACAAA
AGTGCATCGCTTCGCGGTCAGGTAATCATGTGGCATCGCTTTCTCACAGAGGAAGAGCGCAAGGCGGACGATTTGTTCGC
TGTTGCCACCGCTGATCCGCGCCTCATGTTCGGCGAGCCTCCAAACGTCAAACTCCCCAAGAAGGTGCCCGAGGACGTGT
GGGGGACGCCGAAGAAGTCGAACGAGGACGCCGATCCCAACCAAGAGCTGCTGAGGTTCGCATGA

Upstream 100 bases:

>100_bases
GGCGGGTGAGGCCGGCTCCCGAAACACGCTTTACGATTGCAGATCCAGCCTAGCCCCATCATCGCCCCAATTGACGCCGC
AGCCGGTGCCCCGGGTTTAA

Downstream 100 bases:

>100_bases
AGTTCGAGACCAAGATCTTCGATGAACCGCTTCTCGAGTTTGGAAACCAACACTACCATCCCGATCCGCGCCTCGGTCTG
TTCGAGGCTGGGCCGCTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM
IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD
KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK
GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR
AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK
SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA

Sequences:

>Translated_474_residues
MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM
IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD
KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK
GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR
AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK
SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA
>Mature_474_residues
MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMGFQFDVRSRLESGIDGIAEVM
IEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLAYWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFD
KTLDVLDARAVDRLAALTIPKTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK
GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDLGWDKEGRLFHFRARAENESR
AFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRFELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDK
SASLRGQVIMWHRFLTEEERKADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53504; Mature: 53504

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHEEEEEEEEC
FQFDVRSRLESGIDGIAEVMIEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLA
EEECHHHHHHHCHHHHHHHEECCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCEE
YWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFDKTLDVLDARAVDRLAALTIP
EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECC
KTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK
CCCCCEECCCCCCCHHHHHEEEEECCCCCEEEEECCCCHHHHEEEEEECCCCCEEEEEEE
GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDL
CCCEEEECCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
GWDKEGRLFHFRARAENESRAFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRF
CCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
ELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDKSASLRGQVIMWHRFLTEEER
HHHHHCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHCHHHC
KADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA
CCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MIQSNRAGPGPVQSGNRDKNPMGSVRILFYDAHMAKTITPNQLLGQIGEIAVQLRFLTMG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCHHHHHHHHHHHHEEEEEEEEC
FQFDVRSRLESGIDGIAEVMIEGQPTARMIAVQVKATDAGIYAGEDASGFTYLLRSEDLA
EEECHHHHHHHCHHHHHHHEECCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCEE
YWRGSNLPIIIVLFRKSDETHYWKEISSGTGPGERRLTFDKTLDVLDARAVDRLAALTIP
EEECCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHEECC
KTGFGYYVPPLGGGEEALVNILPVRLPDEVFVTTTPYTAKQATAMLLDAGAPARFDWAIK
CCCCCEECCCCCCCHHHHHEEEEECCCCCEEEEECCCCHHHHEEEEEECCCCCEEEEEEE
GSSFWSFHDPRISSCDQIVDLDQVEAIEVEHLAFHEDLDERNNFAFLLNQALRHQVRSDL
CCCEEEECCCCCCCHHHHCCCCCCCEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
GWDKEGRLFHFRARAENESRAFHYQSAKKKAEADVVNVVRNKTDPTRVEFVRHHAFVPRF
CCCCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHH
ELLYDQWFLVINPTYYFTTNGFIPHSYPSALLAGKKRLDKSASLRGQVIMWHRFLTEEER
HHHHHCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHCHHHC
KADDLFAVATADPRLMFGEPPNVKLPKKVPEDVWGTPKKSNEDADPNQELLRFA
CCCCEEEEEECCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA