| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475180
Identifier: 13475180
GI number: 13475180
Start: 5018756
End: 5019340
Strand: Direct
Name: 13475180
Synonym: mlr6200
Alternate gene names: NA
Gene position: 5018756-5019340 (Clockwise)
Preceding gene: 13475179
Following gene: 13475182
Centisome position: 71.33
GC content: 59.15
Gene sequence:
>585_bases ATGCGGAAGACAAAATGCGTAGGCTGCGGCCGCCAGGCGCCGAGCTTCGAGATCGTCGAATACGGCTCGACCGAAGCCGG ATATAAACGGCTTTGCCGGCGCTGCTTTAATCGCGAGGCAGCCGCGGCAGCTGGCCTGGACAGCTTCGAGCATGTCGACT TTGATCAGATCCGGCTGAAAGACGCCGACGGGAAATTCCACGAATTCCACTTCACGACATTCCTGTTCGGCACGGGCGTC GCCTTGGACGCATTCGAGCTCCGCAACGGCGACCCAGGGGGCTACCGGTTCCAGGTGATTGCAGAACCCGACGAAGACCC TCTCGCCATGCTCGGCCGGCTGATCGCGAAAATACGGCGCGCCCTGGCCGTAAAACATCTCGAGGACGGTGAGTACGGTT TGCAGATCGGACAGGCCGGGGTCGTTCGGGGCCTGATCGATTGGGACGCCGCGCAAGATGGACATCTGCCCCTCCTTGTC ATCGATGGGCGGGAGATTTCTTGGGATGATTTCGGCCGCTGCCTGATGACCTTCGAAGGAGCTCAATTCAAATTGGAGAT TAGAGACAAGAGTGAGGAACTTTGA
Upstream 100 bases:
>100_bases CTGAGATGGTGGACGAGGGGTAGGTCGCCGCCGTGACCGACCTGCCAAAGAAAGGTTCCAGCACTACGCCGCATTCATCG CGGCCAGAAGTTGAGGCCCC
Downstream 100 bases:
>100_bases CATTCCTCATTTGAGGCTGAGATGAAAGATCGCGATGAGGCTTTGATAAAGCCCGACCTCCAGCACACGTCGATAGGCCG CCAGCAAATCGCAAGACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MRKTKCVGCGRQAPSFEIVEYGSTEAGYKRLCRRCFNREAAAAAGLDSFEHVDFDQIRLKDADGKFHEFHFTTFLFGTGV ALDAFELRNGDPGGYRFQVIAEPDEDPLAMLGRLIAKIRRALAVKHLEDGEYGLQIGQAGVVRGLIDWDAAQDGHLPLLV IDGREISWDDFGRCLMTFEGAQFKLEIRDKSEEL
Sequences:
>Translated_194_residues MRKTKCVGCGRQAPSFEIVEYGSTEAGYKRLCRRCFNREAAAAAGLDSFEHVDFDQIRLKDADGKFHEFHFTTFLFGTGV ALDAFELRNGDPGGYRFQVIAEPDEDPLAMLGRLIAKIRRALAVKHLEDGEYGLQIGQAGVVRGLIDWDAAQDGHLPLLV IDGREISWDDFGRCLMTFEGAQFKLEIRDKSEEL >Mature_194_residues MRKTKCVGCGRQAPSFEIVEYGSTEAGYKRLCRRCFNREAAAAAGLDSFEHVDFDQIRLKDADGKFHEFHFTTFLFGTGV ALDAFELRNGDPGGYRFQVIAEPDEDPLAMLGRLIAKIRRALAVKHLEDGEYGLQIGQAGVVRGLIDWDAAQDGHLPLLV IDGREISWDDFGRCLMTFEGAQFKLEIRDKSEEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21749; Mature: 21749
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00014 ER_TARGET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTKCVGCGRQAPSFEIVEYGSTEAGYKRLCRRCFNREAAAAAGLDSFEHVDFDQIRLK CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHEEEE DADGKFHEFHFTTFLFGTGVALDAFELRNGDPGGYRFQVIAEPDEDPLAMLGRLIAKIRR CCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH ALAVKHLEDGEYGLQIGQAGVVRGLIDWDAAQDGHLPLLVIDGREISWDDFGRCLMTFEG HHHHHHCCCCCCCEEECCCHHHEEEECCCCCCCCCEEEEEECCCEECHHHHCCEEEEECC AQFKLEIRDKSEEL CEEEEEECCCCCCC >Mature Secondary Structure MRKTKCVGCGRQAPSFEIVEYGSTEAGYKRLCRRCFNREAAAAAGLDSFEHVDFDQIRLK CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHEEEE DADGKFHEFHFTTFLFGTGVALDAFELRNGDPGGYRFQVIAEPDEDPLAMLGRLIAKIRR CCCCCEEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHH ALAVKHLEDGEYGLQIGQAGVVRGLIDWDAAQDGHLPLLVIDGREISWDDFGRCLMTFEG HHHHHHCCCCCCCEEECCCHHHEEEECCCCCCCCCEEEEEECCCEECHHHHCCEEEEECC AQFKLEIRDKSEEL CEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA