Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475183

Identifier: 13475183

GI number: 13475183

Start: 5021381

End: 5022898

Strand: Direct

Name: 13475183

Synonym: mlr6204

Alternate gene names: NA

Gene position: 5021381-5022898 (Clockwise)

Preceding gene: 13475182

Following gene: 13475187

Centisome position: 71.37

GC content: 55.86

Gene sequence:

>1518_bases
GTGGGGGACGCCGAAGAAGTCGAACGAGGACGCCGATCCCAACCAAGAGCTGCTGAGGTTCGCATGAAGTTCGAGACCAA
GATCTTCGATGAACCGCTTCTCGAGTTTGGAAACCAACACTACCATCCCGATCCGCGCCTCGGTCTGTTCGAGGCTGGGC
CGCTCCAGACGCCGCTTGGTGATGTCATCAACATTGCTGTCGTAGGGAGTGCGAAGACCGTCAAGGACTCTCGCGACTTC
CTTCAAGCCGCTGCGGTCGGATTCGCAGGAAAATCGGAAAAGCATCCAAACCTGCATCCGCCGTTTCCGGGCCTCGGAAA
TCAGAACCCTTTCCGCTGCCGGTTCGAGATTCCGGATGGCGCGGTTACCGCGATCCCCCAGGCGCGCATTGAACGTATCA
GGAAAGAACCCCATCACGGCAAAGCAGTCGAGATGGCGGTCGATGAAATCATTGAGCAGCTACAGACGATCGATGAGGGC
AGCTCACGGCCGGATGTCGCCATCATTGCGCTACCGGTTGAGCTGATCGAGCGCGTTTGGAACGCCAAAGTCGATTCTGA
CGCGACGTTGGAGGAGGAAGATAGCTCGGGCTCTGATGCCCCCAATTTCCGCGGCATGCTGAAAGCCAAGGCGATGCACT
TTCGCTTTCCCATTCAGATCGTCTGGGAAGACGTGCTCGACGAGCGTGCTGTTATCCCTCTGAAGATCAAAGAGAGCAGC
GCCCGACAAATTCAGGATCAAGCCAGCCGTACCTGGAATCTCCTAACCACCCTTTACTACAAAGGGTCTGGGCGTGTGCC
GTGGCGGCGAGCGCCTCAAGAGGGAGAGTTTTCGGCCTGCTACATCGGGGTGAGCTTTTATCGCGAGGCCGGTGGACAAC
AGCTCTTCACGAGCGCAGCTCAGATGTTCGATGAGCGCGGAAGAGGCTTCATCCTTAAGGGTAAAGGCGCGCAGACGGAA
AGTCGTGGCAGGCATCCCTATCTGACGCAGGACGATGCGAAGACTCTGATTGCCGATGCTCTCGCCGCCTACAAAAAGCA
TCACATGAATTATCCGGCGCGGGTCATAGTGCTGAAAACATCGCGCTTTCGCGACGAAGAAGCCGACGGGATTTTTGAAG
CGCTTGATGAGGTCGGCACCGAACTGCGCGATCTCGTGTGGGTTCAGGAATCGTCGTTTGTGAAGGTATTCAGGGACGGC
AATTATCCCGTCATGCGCGGCACGTTCGTGAAACTTGACGGGAAAGGCTTGCTCTACACCAACGGCAGCATTCCCTATTA
TGGGACATACCCCGGCATGTATGATCCGAAGCCGCTGTTGATCTGCCCCTACAAAACTAGTGATAGCACGGTCGCGCAGA
TCGCGAACGAGATCTTCGGTCTAACGAAAATCAACTGGAACTCCACACAGATGAACCAGAAGCTGCCGATCCCCATTCGT
GCAGCACGCAAAGTGGGCGAAGTCCTTAAGTACATCACCGATGAGAAGGTGAGTTCCGACTACCGCAGATACATTTGA

Upstream 100 bases:

>100_bases
GCAAGGCGGACGATTTGTTCGCTGTTGCCACCGCTGATCCGCGCCTCATGTTCGGCGAGCCTCCAAACGTCAAACTCCCC
AAGAAGGTGCCCGAGGACGT

Downstream 100 bases:

>100_bases
CCGGAATCTGCCGTTGCCTGCCGCTTCGACAGGCACGAGCTGGGTCTATCTCGTGCTCGACTGTAAGCCGTGGGCGGGTA
TTCCTCTTATCCAACGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 504

Protein sequence:

>505_residues
MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDF
LQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEG
SSRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS
ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTE
SRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDG
NYPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR
AARKVGEVLKYITDEKVSSDYRRYI

Sequences:

>Translated_505_residues
MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDF
LQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEG
SSRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS
ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTE
SRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDG
NYPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR
AARKVGEVLKYITDEKVSSDYRRYI
>Mature_504_residues
GDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLGDVINIAVVGSAKTVKDSRDFL
QAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDGAVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGS
SRPDVAIIALPVELIERVWNAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESSA
RQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAAQMFDERGRGFILKGKGAQTES
RGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKTSRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGN
YPVMRGTFVKLDGKGLLYTNGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIRA
ARKVGEVLKYITDEKVSSDYRRYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56858; Mature: 56727

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLG
CCCHHHHHHCCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC
DVINIAVVGSAKTVKDSRDFLQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDG
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
AVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGSSRPDVAIIALPVELIERVW
CEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH
NAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEEECCCH
ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAA
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH
QMFDERGRGFILKGKGAQTESRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKT
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
SRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGNYPVMRGTFVKLDGKGLLYT
CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEEEEEECCCEEEEE
NGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR
CCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHH
AARKVGEVLKYITDEKVSSDYRRYI
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GDAEEVERGRRSQPRAAEVRMKFETKIFDEPLLEFGNQHYHPDPRLGLFEAGPLQTPLG
CCHHHHHHCCCCCCCHHHEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCC
DVINIAVVGSAKTVKDSRDFLQAAAVGFAGKSEKHPNLHPPFPGLGNQNPFRCRFEIPDG
CCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
AVTAIPQARIERIRKEPHHGKAVEMAVDEIIEQLQTIDEGSSRPDVAIIALPVELIERVW
CEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHH
NAKVDSDATLEEEDSSGSDAPNFRGMLKAKAMHFRFPIQIVWEDVLDERAVIPLKIKESS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCHHHHHHHHHCCCCEEEEEECCCH
ARQIQDQASRTWNLLTTLYYKGSGRVPWRRAPQEGEFSACYIGVSFYREAGGQQLFTSAA
HHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEHHHHHHCCCHHHHHHHH
QMFDERGRGFILKGKGAQTESRGRHPYLTQDDAKTLIADALAAYKKHHMNYPARVIVLKT
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEC
SRFRDEEADGIFEALDEVGTELRDLVWVQESSFVKVFRDGNYPVMRGTFVKLDGKGLLYT
CCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCEEEEEEEEECCCEEEEE
NGSIPYYGTYPGMYDPKPLLICPYKTSDSTVAQIANEIFGLTKINWNSTQMNQKLPIPIR
CCCCCEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCEEECCCCHHCCCCCCCCHH
AARKVGEVLKYITDEKVSSDYRRYI
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]