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The map label for this gene is 13475170

Identifier: 13475170

GI number: 13475170

Start: 5008283

End: 5008831

Strand: Direct

Name: 13475170

Synonym: mlr6188

Alternate gene names: NA

Gene position: 5008283-5008831 (Clockwise)

Preceding gene: 13475169

Following gene: 13475171

Centisome position: 71.18

GC content: 64.12

Gene sequence:

>549_bases
ATGAGCCAGCGGCCTTCCATCCATCTGATCGGCAGCCGTTTGCGGCGCGTTCGGGCGCGCAACGCAATCGCCATCGCCGC
GATTGGCCTGAGCCTGACAGGCTTCACGGCGCTCCCAAAGCCGTCTCCCTTGCTGGTCTGGAACGCCTCGGCTAGCGCGC
CGGTCGGTCTCTATCGCGTTGGGTCTGGCACGCCTGCGCGCGGCGATCTTGTGCTCGCCCGCCCGCCTGGCTTCGTTGCC
TATCTCGCCGACCAACGCGGCTATCTGCCTCGCAATATACCGCTGGTGAAGCGTCTCGCCGCGCTGCCGGACGAGCATGT
CTGCGCCTTTAGTAATGCCATCATCATAGGCGGCGAGATCGTCGCCCGTCGGCTCAAAATCGACACGCAAGGCCGTCCGC
TGCCCTGGTGGAACGGCTGCCGAGCGCTCGCCCATGACGAGGTTTTCCTGCTCGGCAACGAAAAAAATCACTCCTTCGAC
AGTCGCTATTTCGGGCCGGTGCCGGCCGAAAACATCATCGGGAGGCTGGTGCCGCTATGGACCGAGTGA

Upstream 100 bases:

>100_bases
ACATCGACGAACTCGACGACTGGTCGAAAGGCCGCCCGCCAGAACCCGGCTCCGACGATGACAAGGGCGGGTCCGGCTCA
GCCGACGAGGGAGCCCGCTC

Downstream 100 bases:

>100_bases
CCCTCCTGATGCTCGGCATGATCGCCGTCGCGCCATGCGCCTGTTCCGCCTCGACCGGCGCTGAGCCAGCCGTCATCTCC
CAAAGTCCGCAGCTGCAACG

Product: plasmid transfer protein traF

Products: NA

Alternate protein names: Conjugal Transfer Protein TraF; TraF Peptidase; Conjugal Transfer TRAF Transmembrane Protein; Type IV Secretory Pathway Protease TraF-Like Protein; Peptidase; Plasmid Transfer Protein TraF; Type IV Secretory Pathway Protease TraF; Conjugative Transfer Signal Peptidase TraF; Peptidase S; Raf Peptidase. Serine Peptidase. Merops Family; Conjugal Transfer Protein Traf; Conjugal Transfer TraF Transmembrane Protein; Plasmid Transfer Protein Traf; Traf Peptidase Serine Peptidase Merops Family; Transmembrane Anchor Conjugal Transfer Protein; RaF Peptidase. Serine Peptidase. MEROPS Family; TraF Peptidase Serine Peptidase MEROPS Family

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSQRPSIHLIGSRLRRVRARNAIAIAAIGLSLTGFTALPKPSPLLVWNASASAPVGLYRVGSGTPARGDLVLARPPGFVA
YLADQRGYLPRNIPLVKRLAALPDEHVCAFSNAIIIGGEIVARRLKIDTQGRPLPWWNGCRALAHDEVFLLGNEKNHSFD
SRYFGPVPAENIIGRLVPLWTE

Sequences:

>Translated_182_residues
MSQRPSIHLIGSRLRRVRARNAIAIAAIGLSLTGFTALPKPSPLLVWNASASAPVGLYRVGSGTPARGDLVLARPPGFVA
YLADQRGYLPRNIPLVKRLAALPDEHVCAFSNAIIIGGEIVARRLKIDTQGRPLPWWNGCRALAHDEVFLLGNEKNHSFD
SRYFGPVPAENIIGRLVPLWTE
>Mature_181_residues
SQRPSIHLIGSRLRRVRARNAIAIAAIGLSLTGFTALPKPSPLLVWNASASAPVGLYRVGSGTPARGDLVLARPPGFVAY
LADQRGYLPRNIPLVKRLAALPDEHVCAFSNAIIIGGEIVARRLKIDTQGRPLPWWNGCRALAHDEVFLLGNEKNHSFDS
RYFGPVPAENIIGRLVPLWTE

Specific function: Unknown

COG id: COG4959

COG function: function code OU; Type IV secretory pathway, protease TraF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19844; Mature: 19713

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQRPSIHLIGSRLRRVRARNAIAIAAIGLSLTGFTALPKPSPLLVWNASASAPVGLYRV
CCCCCCEEHHHHHHHHHHHCCEEEEEEECEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
GSGTPARGDLVLARPPGFVAYLADQRGYLPRNIPLVKRLAALPDEHVCAFSNAIIIGGEI
CCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECHHH
VARRLKIDTQGRPLPWWNGCRALAHDEVFLLGNEKNHSFDSRYFGPVPAENIIGRLVPLW
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
TE
CC
>Mature Secondary Structure 
SQRPSIHLIGSRLRRVRARNAIAIAAIGLSLTGFTALPKPSPLLVWNASASAPVGLYRV
CCCCCEEHHHHHHHHHHHCCEEEEEEECEEEECCCCCCCCCEEEEECCCCCCCEEEEEE
GSGTPARGDLVLARPPGFVAYLADQRGYLPRNIPLVKRLAALPDEHVCAFSNAIIIGGEI
CCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCEEEECHHH
VARRLKIDTQGRPLPWWNGCRALAHDEVFLLGNEKNHSFDSRYFGPVPAENIIGRLVPLW
EEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
TE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA