Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475169

Identifier: 13475169

GI number: 13475169

Start: 5008017

End: 5008286

Strand: Direct

Name: 13475169

Synonym: msr6186

Alternate gene names: NA

Gene position: 5008017-5008286 (Clockwise)

Preceding gene: 13475168

Following gene: 13475170

Centisome position: 71.18

GC content: 65.56

Gene sequence:

>270_bases
ATGGACGACGAAAACGACCGCGCGGCCCGCGCCAAGAAGGGCAGTCCGTTTCTGAACACCGCGCAGGCTGCCTTCTATAT
CGGCCTATCCCAGCGCACCCTGGAAAAGATGCGGCTGACCGGCGGCGGCCCGAAATACCGCAAGCACGGCCGCTATGTCC
GCTACCACATCGACGAACTCGACGACTGGTCGAAAGGCCGCCCGCCAGAACCCGGCTCCGACGATGACAAGGGCGGGTCC
GGCTCAGCCGACGAGGGAGCCCGCTCATGA

Upstream 100 bases:

>100_bases
AGGGGCGGCGAAAACTCCCACCCGACTCTTCGCCCGTCCCCAGGACGACCTCGCTCGCCGATCCTCGCGGTCGCTTGTCC
GAAGCGAAACGAGGACCATC

Downstream 100 bases:

>100_bases
GCCAGCGGCCTTCCATCCATCTGATCGGCAGCCGTTTGCGGCGCGTTCGGGCGCGCAACGCAATCGCCATCGCCGCGATT
GGCCTGAGCCTGACAGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MDDENDRAARAKKGSPFLNTAQAAFYIGLSQRTLEKMRLTGGGPKYRKHGRYVRYHIDELDDWSKGRPPEPGSDDDKGGS
GSADEGARS

Sequences:

>Translated_89_residues
MDDENDRAARAKKGSPFLNTAQAAFYIGLSQRTLEKMRLTGGGPKYRKHGRYVRYHIDELDDWSKGRPPEPGSDDDKGGS
GSADEGARS
>Mature_89_residues
MDDENDRAARAKKGSPFLNTAQAAFYIGLSQRTLEKMRLTGGGPKYRKHGRYVRYHIDELDDWSKGRPPEPGSDDDKGGS
GSADEGARS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9815; Mature: 9815

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDENDRAARAKKGSPFLNTAQAAFYIGLSQRTLEKMRLTGGGPKYRKHGRYVRYHIDEL
CCCCCCCCHHCCCCCCCCCCCCCHHEECCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
DDWSKGRPPEPGSDDDKGGSGSADEGARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDENDRAARAKKGSPFLNTAQAAFYIGLSQRTLEKMRLTGGGPKYRKHGRYVRYHIDEL
CCCCCCCCHHCCCCCCCCCCCCCHHEECCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
DDWSKGRPPEPGSDDDKGGSGSADEGARS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA