Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475105

Identifier: 13475105

GI number: 13475105

Start: 4945710

End: 4946753

Strand: Reverse

Name: 13475105

Synonym: mll6112

Alternate gene names: NA

Gene position: 4946753-4945710 (Counterclockwise)

Preceding gene: 13475111

Following gene: 13475104

Centisome position: 70.31

GC content: 59.96

Gene sequence:

>1044_bases
GTGGAGCAAATTATTCGAATTGGCATGGACACGTCAAAGCACGTCTTTCAACTGCATGGTGTGAATGCAGCCGAAGAGGT
CGTGCTGCGCAAAAAAATGCGGCGTAAGGAGATGGTGGCTTTCTTCGAGAGGGCGGCGCCAACGGTGGTCGCGCTCGAAG
CGTGCGGCGGATCGCATCATTGGGCCCGCCTGCTTGAGGCGCTTGGCCATGACGTGAAACTGATCCCGCCGCAATATGTC
AAACCGTACGTAAAGCGCGGCAAGAACGACGCGGCCGATGCGGAGGCTCTTTGCGAAGCGGTAAGCCGCCCGACGATGCG
CTTCGTTCGGGTAAAAACCACCGACAACCAGGCGGCTTTGATGCTGGTCGGCATGCGTGACCGACTGGTTCGCAATCGCA
CGCAACTTGCCAACGCCATCCGCGGATACGCTGCCGAGTTCGGATTGATCGCTGCCACAGGTACATCGAAGGTCAGATCA
TTGCTCGAGCGTATCGCGACTGATGAAACGCTGCCTGAACTGGCACGTGAACTGTTTGGGCTGCACGGCCGCGAATATGA
TCGGCTGGAGGACGAAATCGAAAAGGTCGAAGCACGGCTGATGGCGTGGCATCGCACAAACGAATGCAGTCGACGCCTGA
CACGGATTCCTGGCGTCGGACCGATCGGCGCATTGATGATGGTCATGAAGACCCCGGCGCCCGAGACGTTCCGATCAGGG
CGGCACTTCGCGGCTTGGCTTGGCCTGACGCCGAAGGATCACTCGACAGCTGGCAGGGTCAGGCTTGGCGTGATCACCCG
AGCTGGCGATGAAAATCTGCGAAGCGTGCTCGTCGCGGGCGCCACCGCTGTCCTCCGGCATGTTCGGGAGGACCGCGGGA
AGAATGCGTCCCCATGGCTGCTGGACATGCTCAACCGCAAACCGCCGAAGCTCGTCGCTGTGGCGCTAGCCAATAAAATC
GCCCGCGTCGCCTGGAAGCTGATGGTCACCGGCGAACGATACAATCCCAACGCTGCATTGTCGGCTTATGGCCAGGCAGC
ATAG

Upstream 100 bases:

>100_bases
GCAGACCGTGGTCCAGACCTGTTGGTGTGGACGGCCTCCTGCACGGCATCAATGTGCCAGAATGAGGTCATCGGAGACCT
CAAGCAAAGGAGACCGCCCC

Downstream 100 bases:

>100_bases
AGATCAGTCATCCAGGGGAGCACAATGTGACGCGACCTTGGTAGGCTGAACCCGAACTTGCGGGAAACGAGCAGTTGGTG
TGATCGATCGATCCGAAACG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV
KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS
LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG
RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI
ARVAWKLMVTGERYNPNAALSAYGQAA

Sequences:

>Translated_347_residues
MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV
KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS
LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG
RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI
ARVAWKLMVTGERYNPNAALSAYGQAA
>Mature_347_residues
MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHHWARLLEALGHDVKLIPPQYV
KPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAALMLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRS
LLERIATDETLPELARELFGLHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG
RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWLLDMLNRKPPKLVAVALANKI
ARVAWKLMVTGERYNPNAALSAYGQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 38592; Mature: 38592

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHH
CCCHHEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
WARLLEALGHDVKLIPPQYVKPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAAL
HHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEE
MLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRSLLERIATDETLPELARELFG
EEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHC
LHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCC
RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWL
CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LDMLNRKPPKLVAVALANKIARVAWKLMVTGERYNPNAALSAYGQAA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MEQIIRIGMDTSKHVFQLHGVNAAEEVVLRKKMRRKEMVAFFERAAPTVVALEACGGSHH
CCCHHEECCCCCHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHH
WARLLEALGHDVKLIPPQYVKPYVKRGKNDAADAEALCEAVSRPTMRFVRVKTTDNQAAL
HHHHHHHHCCCEEECCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCEEE
MLVGMRDRLVRNRTQLANAIRGYAAEFGLIAATGTSKVRSLLERIATDETLPELARELFG
EEECHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHC
LHGREYDRLEDEIEKVEARLMAWHRTNECSRRLTRIPGVGPIGALMMVMKTPAPETFRSG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHCC
RHFAAWLGLTPKDHSTAGRVRLGVITRAGDENLRSVLVAGATAVLRHVREDRGKNASPWL
CCEEEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LDMLNRKPPKLVAVALANKIARVAWKLMVTGERYNPNAALSAYGQAA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]