| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475104
Identifier: 13475104
GI number: 13475104
Start: 4945091
End: 4945480
Strand: Reverse
Name: 13475104
Synonym: mll6110
Alternate gene names: NA
Gene position: 4945480-4945091 (Counterclockwise)
Preceding gene: 13475105
Following gene: 13475103
Centisome position: 70.29
GC content: 62.05
Gene sequence:
>390_bases ATGGGATCAAACCGCTGCCCAACATCTTGCAGGGAGGAGGCCGTCCACATATGCATCGTGCACCTGATCCGCCATCTGCT TGAGTTCGTGTCGCGGAAGGTCGCGAAACCGTTGTGCCGACGCTCAGCGCCATCTGCGGGGGGGCGGACGCTAAGCCGGC ATGAAGGCTCTGGAAGACTTCGAGGTCGGCGATACCCGGCGATCATCCAGAGCTGGCGGCGCGGCTGCCAGCACGTCGTG CCGTTCTTCGCCTCCGAGTGTGCGCAACATCATCTACACGACGGATACGGCGTTCGAAATGTCCGCGGCGCGTCGGCGCC ATCTCCAATAGCGCTTAACCCCTGGTCAGTCAGGTCGCACCAGATCGATATGGCTACACGGAGGACGTGA
Upstream 100 bases:
>100_bases AAAAGGCCGCAAAACCTGTTTGGAACTCATGTTGCGGAAACCATCTTGGCCCGCGGTCATGTACGACCGCAATCAGAGGC CGGACATATGATCGCAAGCG
Downstream 100 bases:
>100_bases CGATAGTGGGGTTCCTGTTGCCCTTCTTCAGCCCGCTGATGTACTGCTGGCTGAAGCCGGAGATCTCGGCAAGCTGCTTC TGCGTAAAGCCGGCCTTCTT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVV PFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT
Sequences:
>Translated_129_residues MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVV PFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT >Mature_128_residues GSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVVP FFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT
Specific function: Unknown
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14484; Mature: 14353
Theoretical pI: Translated: 11.81; Mature: 11.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RGRRYPAIIQSWRRGCQHVVPFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHH QIDMATRRT HHHHHHCCC >Mature Secondary Structure GSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC RGRRYPAIIQSWRRGCQHVVPFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHH QIDMATRRT HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA