Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475104

Identifier: 13475104

GI number: 13475104

Start: 4945091

End: 4945480

Strand: Reverse

Name: 13475104

Synonym: mll6110

Alternate gene names: NA

Gene position: 4945480-4945091 (Counterclockwise)

Preceding gene: 13475105

Following gene: 13475103

Centisome position: 70.29

GC content: 62.05

Gene sequence:

>390_bases
ATGGGATCAAACCGCTGCCCAACATCTTGCAGGGAGGAGGCCGTCCACATATGCATCGTGCACCTGATCCGCCATCTGCT
TGAGTTCGTGTCGCGGAAGGTCGCGAAACCGTTGTGCCGACGCTCAGCGCCATCTGCGGGGGGGCGGACGCTAAGCCGGC
ATGAAGGCTCTGGAAGACTTCGAGGTCGGCGATACCCGGCGATCATCCAGAGCTGGCGGCGCGGCTGCCAGCACGTCGTG
CCGTTCTTCGCCTCCGAGTGTGCGCAACATCATCTACACGACGGATACGGCGTTCGAAATGTCCGCGGCGCGTCGGCGCC
ATCTCCAATAGCGCTTAACCCCTGGTCAGTCAGGTCGCACCAGATCGATATGGCTACACGGAGGACGTGA

Upstream 100 bases:

>100_bases
AAAAGGCCGCAAAACCTGTTTGGAACTCATGTTGCGGAAACCATCTTGGCCCGCGGTCATGTACGACCGCAATCAGAGGC
CGGACATATGATCGCAAGCG

Downstream 100 bases:

>100_bases
CGATAGTGGGGTTCCTGTTGCCCTTCTTCAGCCCGCTGATGTACTGCTGGCTGAAGCCGGAGATCTCGGCAAGCTGCTTC
TGCGTAAAGCCGGCCTTCTT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVV
PFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT

Sequences:

>Translated_129_residues
MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVV
PFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT
>Mature_128_residues
GSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRLRGRRYPAIIQSWRRGCQHVVP
FFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSHQIDMATRRT

Specific function: Unknown

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14484; Mature: 14353

Theoretical pI: Translated: 11.81; Mature: 11.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RGRRYPAIIQSWRRGCQHVVPFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHH
QIDMATRRT
HHHHHHCCC
>Mature Secondary Structure 
GSNRCPTSCREEAVHICIVHLIRHLLEFVSRKVAKPLCRRSAPSAGGRTLSRHEGSGRL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
RGRRYPAIIQSWRRGCQHVVPFFASECAQHHLHDGYGVRNVRGASAPSPIALNPWSVRSH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCHH
QIDMATRRT
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA