| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is rosAR [H]
Identifier: 13475111
GI number: 13475111
Start: 4952439
End: 4952903
Strand: Reverse
Name: rosAR [H]
Synonym: mll6119
Alternate gene names: 13475111
Gene position: 4952903-4952439 (Counterclockwise)
Preceding gene: 13475112
Following gene: 13475105
Centisome position: 70.39
GC content: 58.71
Gene sequence:
>465_bases ATGACCGAAGAAACCGAGAGCAAAGCCGACAACCTCATCGAACTCACCGCCCATGTCGTCTCAGCCTATGTTTCGAACAA TCCGGTTCCCGTCGGTGAACTGCCTGGGCTTATCGGCCAGATCCACATCGCATTGAAAGGCACTGCTGGTGGTGCCGCAC CAGAAAAATCGGAAGCTCTCAAGCCTGCCGTACCGATCAGAAAATCGGTTACACCCGACTACATTATCAGCCTTGAGGAC GGTAAGAAGTTCAAGTCGCTCAAGCGTCACCTGGCCACCCACTATGGCCTCACGCCCGACGAATATCGCGCGAAATGGGA GCTGCCGGCGGACTATCCTATGGTGGCGCCGAACTACGCTGCGGCGCGCTCGGCATTGGCCAAGACCATGGGTCTGGGCC GCAAGCCGAAGGAACCGGAAACGCCGGCACCTGCCAAGCGTGCCCGCAAGAAAGCGGCAGCCTGA
Upstream 100 bases:
>100_bases CACATCATGCAATGGCTTTGGTTGCCATCAAACGCGGTCGTCACTATTAAGCTACGAGATGATTCTTACCCGGCTACTCT AATTCCGCAGGAGCGTTTTC
Downstream 100 bases:
>100_bases CCACACTTTTTCAGGATAGGCTAAGCGGATCAGGCATCATTTCGCACTCGCGAGATAAAATTTGTGCGTTGCAATATCCA GGGCTATCGGTATGATCATG
Product: transcriptional regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTEETESKADNLIELTAHVVSAYVSNNPVPVGELPGLIGQIHIALKGTAGGAAPEKSEALKPAVPIRKSVTPDYIISLED GKKFKSLKRHLATHYGLTPDEYRAKWELPADYPMVAPNYAAARSALAKTMGLGRKPKEPETPAPAKRARKKAAA
Sequences:
>Translated_154_residues MTEETESKADNLIELTAHVVSAYVSNNPVPVGELPGLIGQIHIALKGTAGGAAPEKSEALKPAVPIRKSVTPDYIISLED GKKFKSLKRHLATHYGLTPDEYRAKWELPADYPMVAPNYAAARSALAKTMGLGRKPKEPETPAPAKRARKKAAA >Mature_153_residues TEETESKADNLIELTAHVVSAYVSNNPVPVGELPGLIGQIHIALKGTAGGAAPEKSEALKPAVPIRKSVTPDYIISLEDG KKFKSLKRHLATHYGLTPDEYRAKWELPADYPMVAPNYAAARSALAKTMGLGRKPKEPETPAPAKRARKKAAA
Specific function: Unknown
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 - InterPro: IPR015880 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 16522; Mature: 16391
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEETESKADNLIELTAHVVSAYVSNNPVPVGELPGLIGQIHIALKGTAGGAAPEKSEAL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCHHCC KPAVPIRKSVTPDYIISLEDGKKFKSLKRHLATHYGLTPDEYRAKWELPADYPMVAPNYA CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHCEEECCCCCCCCCCCCHH AARSALAKTMGLGRKPKEPETPAPAKRARKKAAA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure TEETESKADNLIELTAHVVSAYVSNNPVPVGELPGLIGQIHIALKGTAGGAAPEKSEAL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEEEECCCCCCCCCCHHCC KPAVPIRKSVTPDYIISLEDGKKFKSLKRHLATHYGLTPDEYRAKWELPADYPMVAPNYA CCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCHHHCEEECCCCCCCCCCCCHH AARSALAKTMGLGRKPKEPETPAPAKRARKKAAA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7579618 [H]