| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474873
Identifier: 13474873
GI number: 13474873
Start: 4726835
End: 4727737
Strand: Reverse
Name: 13474873
Synonym: mll5853
Alternate gene names: NA
Gene position: 4727737-4726835 (Counterclockwise)
Preceding gene: 13474874
Following gene: 13474868
Centisome position: 67.19
GC content: 60.13
Gene sequence:
>903_bases ATGACCTCGGGCCATCTCGTCGTCATTCGGGACAGTTTTGCCGAAAGGCAGCTTGACCTTTTGAAGAAAGGGCTCGCGGC CGATCAGGTCATTCCCTATCTCGGCCCGGGTCTGCTTGAGATCCGCTCCGCGGGACCGCCCGTACCGCATACCCCCGAAG CCGTTGCCGCAGCGCTCAACAAGCGCGCGCCAGCCCCTTCGAAGATTCGCACCAACATGTGGTCGGTAGCGCAGTATATC GAACAGCGCCGGCACCGCCGGACGCTTCAAGTTTGGATGGCCGAAATATTCGCGGCCCCGGTGGTGCCGACCATCTTGCA TGCCTGGCTTGCAACGCTGCCGCTCTCCGTGATCGTCGACAGCTGGTACGACGGTGCCATGCGCGCGGCTCTAATACAGA CCCGCCGAACGGACGTCGTCGAAATACAGGGCGTAACACGGGCGCACGAGATCGGTGACATTTGGACGAAAGCCTACGAT TTGTCCGGGATATTACTCGAATCCGCACCAGCGGCGAAGACGGTTCTCTACGCCCCTCACGGCGGTGCCAGGCCGGCCGC AAACTTCCTCGTCGCAGATTCCGACTACGTTGAAGTGCTGAGCGAAATCGACATCCAGACGCCGATCCCTGACCTGGTGA AGGAACGGCGAGCTAGTCGTGGTCTTTTCTTCATCGGCTGCCGCTTCAACGATCAGATGCTGCGCACCTATGCCCGGCAG ATCATGAAGCGCTCCAATGGCCCACATTTTGCGGCAATCGATACAGCGACGCTGACCAAGAACGAGCGTCGTTTCCTTGC GGCAAGCGCAATCACGGTCATTGACATGCCGACGGGTCAGGCCGCAGCCCGTCTCGTCGGACTGGGCGAGACATTGCATG AAGCCAAACGGGGTATCGTTTGA
Upstream 100 bases:
>100_bases CGCCTTTGCCGATTACCGTGGAAGCAAGGAAGATTTCCGACGAGGACTGACCTTCGGGTTGACACAAAGAGAGCGGCAAA GGGATACGAGCATGAACACA
Downstream 100 bases:
>100_bases GCCATTCTCAGACACCTCAACATTGCCGAAAAGGTAAAACGGGCAATTGACTTCCGGGTTTTTCAACAACTCCGAGAGGC ACTCTGAAAAGCTACGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTSGHLVVIRDSFAERQLDLLKKGLAADQVIPYLGPGLLEIRSAGPPVPHTPEAVAAALNKRAPAPSKIRTNMWSVAQYI EQRRHRRTLQVWMAEIFAAPVVPTILHAWLATLPLSVIVDSWYDGAMRAALIQTRRTDVVEIQGVTRAHEIGDIWTKAYD LSGILLESAPAAKTVLYAPHGGARPAANFLVADSDYVEVLSEIDIQTPIPDLVKERRASRGLFFIGCRFNDQMLRTYARQ IMKRSNGPHFAAIDTATLTKNERRFLAASAITVIDMPTGQAAARLVGLGETLHEAKRGIV
Sequences:
>Translated_300_residues MTSGHLVVIRDSFAERQLDLLKKGLAADQVIPYLGPGLLEIRSAGPPVPHTPEAVAAALNKRAPAPSKIRTNMWSVAQYI EQRRHRRTLQVWMAEIFAAPVVPTILHAWLATLPLSVIVDSWYDGAMRAALIQTRRTDVVEIQGVTRAHEIGDIWTKAYD LSGILLESAPAAKTVLYAPHGGARPAANFLVADSDYVEVLSEIDIQTPIPDLVKERRASRGLFFIGCRFNDQMLRTYARQ IMKRSNGPHFAAIDTATLTKNERRFLAASAITVIDMPTGQAAARLVGLGETLHEAKRGIV >Mature_299_residues TSGHLVVIRDSFAERQLDLLKKGLAADQVIPYLGPGLLEIRSAGPPVPHTPEAVAAALNKRAPAPSKIRTNMWSVAQYIE QRRHRRTLQVWMAEIFAAPVVPTILHAWLATLPLSVIVDSWYDGAMRAALIQTRRTDVVEIQGVTRAHEIGDIWTKAYDL SGILLESAPAAKTVLYAPHGGARPAANFLVADSDYVEVLSEIDIQTPIPDLVKERRASRGLFFIGCRFNDQMLRTYARQI MKRSNGPHFAAIDTATLTKNERRFLAASAITVIDMPTGQAAARLVGLGETLHEAKRGIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32984; Mature: 32852
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGHLVVIRDSFAERQLDLLKKGLAADQVIPYLGPGLLEIRSAGPPVPHTPEAVAAALN CCCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHH KRAPAPSKIRTNMWSVAQYIEQRRHRRTLQVWMAEIFAAPVVPTILHAWLATLPLSVIVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWYDGAMRAALIQTRRTDVVEIQGVTRAHEIGDIWTKAYDLSGILLESAPAAKTVLYAPH HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCC GGARPAANFLVADSDYVEVLSEIDIQTPIPDLVKERRASRGLFFIGCRFNDQMLRTYARQ CCCCCCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH IMKRSNGPHFAAIDTATLTKNERRFLAASAITVIDMPTGQAAARLVGLGETLHEAKRGIV HHHHCCCCCEEEEEHHHHCCCCHHHHEEHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSGHLVVIRDSFAERQLDLLKKGLAADQVIPYLGPGLLEIRSAGPPVPHTPEAVAAALN CCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHH KRAPAPSKIRTNMWSVAQYIEQRRHRRTLQVWMAEIFAAPVVPTILHAWLATLPLSVIVD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWYDGAMRAALIQTRRTDVVEIQGVTRAHEIGDIWTKAYDLSGILLESAPAAKTVLYAPH HHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEECCC GGARPAANFLVADSDYVEVLSEIDIQTPIPDLVKERRASRGLFFIGCRFNDQMLRTYARQ CCCCCCCCEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH IMKRSNGPHFAAIDTATLTKNERRFLAASAITVIDMPTGQAAARLVGLGETLHEAKRGIV HHHHCCCCCEEEEEHHHHCCCCHHHHEEHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA