Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474868

Identifier: 13474868

GI number: 13474868

Start: 4719810

End: 4720181

Strand: Reverse

Name: 13474868

Synonym: mll5844

Alternate gene names: NA

Gene position: 4720181-4719810 (Counterclockwise)

Preceding gene: 13474873

Following gene: 161621446

Centisome position: 67.09

GC content: 55.65

Gene sequence:

>372_bases
GTGTTGCGGTATATCGGGCGTACGAGATCAAGCATCTTGATGATGCCTTTCGGTCGGAGATCGAAAACATGCGAATCCAA
ACATGAGGCCCTGATCCCGCCCTTGCTCGAGATCCTGCCATCGTCCTTCATCAACGCCCTGGCTGATGCCGGGCGACTGC
CCGGTGAGAGCCAGAACGACGGCGCAATTTCGACCATCAAAGCCGATGGCATCGTCGTAGCCAATATCGAGTATCGTATC
GCGGGCGACTTGGGTGTAATCGATGTGCGCATGGCTGGTACCCTCGTCCTGCTGGCTTTGTCATTTCGCGCTCTTCGCAA
ATGCTGTTTGGCGGCGGAACATAAAACGACACCAGATTTCTGCCGCCACTGA

Upstream 100 bases:

>100_bases
CGCAGCTGCCGGTCCTGCCTCACGCAGCAAGTCGTCGGCTCTGTCCGTCTTCTCCCAGGTGAACTCAGGCTCTTCACGGC
CGAAGTGTCCGTATGTCGCC

Downstream 100 bases:

>100_bases
TCTCGAAAGTTGTGATGAGCGTACCATTGACAGCGATTTGCGCTCGCAACGATTCCATGAATTTCTTTGAAGGATCTGTT
GCAACGCTAAACAACAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLRYIGRTRSSILMMPFGRRSKTCESKHEALIPPLLEILPSSFINALADAGRLPGESQNDGAISTIKADGIVVANIEYRI
AGDLGVIDVRMAGTLVLLALSFRALRKCCLAAEHKTTPDFCRH

Sequences:

>Translated_123_residues
MLRYIGRTRSSILMMPFGRRSKTCESKHEALIPPLLEILPSSFINALADAGRLPGESQNDGAISTIKADGIVVANIEYRI
AGDLGVIDVRMAGTLVLLALSFRALRKCCLAAEHKTTPDFCRH
>Mature_123_residues
MLRYIGRTRSSILMMPFGRRSKTCESKHEALIPPLLEILPSSFINALADAGRLPGESQNDGAISTIKADGIVVANIEYRI
AGDLGVIDVRMAGTLVLLALSFRALRKCCLAAEHKTTPDFCRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13425; Mature: 13425

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYIGRTRSSILMMPFGRRSKTCESKHEALIPPLLEILPSSFINALADAGRLPGESQND
CCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GAISTIKADGIVVANIEYRIAGDLGVIDVRMAGTLVLLALSFRALRKCCLAAEHKTTPDF
CCEEEEECCCEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CRH
HCC
>Mature Secondary Structure
MLRYIGRTRSSILMMPFGRRSKTCESKHEALIPPLLEILPSSFINALADAGRLPGESQND
CCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GAISTIKADGIVVANIEYRIAGDLGVIDVRMAGTLVLLALSFRALRKCCLAAEHKTTPDF
CCEEEEECCCEEEEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
CRH
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA