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The map label for this gene is fixU [H]

Identifier: 13474874

GI number: 13474874

Start: 4727788

End: 4728000

Strand: Reverse

Name: fixU [H]

Synonym: msl5852

Alternate gene names: 13474874

Gene position: 4728000-4727788 (Counterclockwise)

Preceding gene: 13474875

Following gene: 13474873

Centisome position: 67.2

GC content: 56.34

Gene sequence:

>213_bases
ATGAGGGTAATGATCCGCAGGACCCGTGCTGGCTTGTCGGCATATATTCCCAAAAAGGATCTCGAAGAGCCGATCATCAA
GGTCGACAACGAACACTTATGGGGTGGCGCCGTGACGCTGAAGAACGGCTGGCGGCTAGTCCTGCCCGACCTTCCGCGCG
ATACGCCTTTGCCGATTACCGTGGAAGCAAGGAAGATTTCCGACGAGGACTGA

Upstream 100 bases:

>100_bases
CCGTCGTCGGCATGCGTGCGCGTGAACTCATGAGCCTTGAGACGGCCCGGACTCCTTCCAGTGCCGAAATCGGTGCTGGG
TTTGACGAAGGAACGGCCCG

Downstream 100 bases:

>100_bases
CCTTCGGGTTGACACAAAGAGAGCGGCAAAGGGATACGAGCATGAACACAATGACCTCGGGCCATCTCGTCGTCATTCGG
GACAGTTTTGCCGAAAGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MRVMIRRTRAGLSAYIPKKDLEEPIIKVDNEHLWGGAVTLKNGWRLVLPDLPRDTPLPITVEARKISDED

Sequences:

>Translated_70_residues
MRVMIRRTRAGLSAYIPKKDLEEPIIKVDNEHLWGGAVTLKNGWRLVLPDLPRDTPLPITVEARKISDED
>Mature_70_residues
MRVMIRRTRAGLSAYIPKKDLEEPIIKVDNEHLWGGAVTLKNGWRLVLPDLPRDTPLPITVEARKISDED

Specific function: Unknown

COG id: COG5554

COG function: function code Q; Nitrogen fixation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To R.leguminosarum Sym plasmid fixU. Also to the N- terminal of R.meliloti mosB protein [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009727 [H]

Pfam domain/function: PF06988 NifT [H]

EC number: NA

Molecular weight: Translated: 8005; Mature: 8005

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMIRRTRAGLSAYIPKKDLEEPIIKVDNEHLWGGAVTLKNGWRLVLPDLPRDTPLPIT
CCEEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCEE
VEARKISDED
EEECCCCCCC
>Mature Secondary Structure
MRVMIRRTRAGLSAYIPKKDLEEPIIKVDNEHLWGGAVTLKNGWRLVLPDLPRDTPLPIT
CCEEEEECCCCCEECCCCCCCCCCEEEECCCCCCCCEEEECCCCEEEECCCCCCCCCCEE
VEARKISDED
EEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]