| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is fabH [H]
Identifier: 13474852
GI number: 13474852
Start: 4699834
End: 4700817
Strand: Reverse
Name: fabH [H]
Synonym: mll5827
Alternate gene names: 13474852
Gene position: 4700817-4699834 (Counterclockwise)
Preceding gene: 13474853
Following gene: 13474851
Centisome position: 66.81
GC content: 65.85
Gene sequence:
>984_bases ATGAGCAAGTCGTCGCGCATTCTCGGGTTCGGTCATCATACGCCTGGGCGCAAGGTGGCGAATGCCGAGATCGAGAACAA TCTCGGCCTCGAGCCGGGCTGGATCGAAAGGCGTACCGGAATCCGTTCGCGCTTCTGGGCAACGGACGGAGACACGCTGT CTGGTCTTGCCACGCAGGCTGGCGACATCGCGCTGGCGAACGCCGGTATTGACCGCAGCGACATCGGGCTGCTGTTGCTT GCCACCTCGACACCCGACCACCTTCTGCCGCCCAGTGCACCCTTGGTCGCGCACAAGCTCGGCCTTGGCCGCGCAGGCGC GGTCGATCTGACCGGCGCCTGCGCCGGCTTCGTCTATGCGCTGATGTTCGCGGACGGGTTCACCCGCCTGCACGGCAAAC CAGCGCTGGTCATCGCCGCCAACATCCTCAGCCGCCGCATCAATCCAGCCGAGCGCGCGAGCTCAGTCCTTTTCGCCGAT GCCGCCGGCGCCCTGGTGATCGGTCCTTGCGAGGATCCCTATCAGGGTATTCTCGGCGCTTCGGTGGATTCCGACGGCTC GCGCTACGGGCTGATCCAGATCCCGGCAGGCGGAAGCAACACCCCGTTCCATGGCGAGCTCGATCTCGAGCAGACCCGCA TGACGATCACCGACGGCCGCGAAGTGTTCGCCAAGGCGGTTGAGATGATGACTGCCTGCTCGCAGGACGCACTCGCGGCG GCCCGGATGCGGCCGCAGGACATCGATCGGTTCGTACCGCACCAGGCCAATGCCCGCATTTTCGATGCGGTCGGGCGAAA CCTCGGCATCGCCGATGAAGCGATCGTCAAGACGATCGCCGAGTATGGCAACTCTTCCGCCGCGACGATCCCGCTCTCGC TGTCGCTCGCCCATCGGGCGGCGCCGTTCCGGCCGGGGGAGAAGGTTCTTCTGGCGGCCGCGGGTGCGGGTCTTAGCGGC GGTGCGCTCGTCGTTGGAATTTAG
Upstream 100 bases:
>100_bases ATGTCCTCTATCTTCTCCCGCCCTATTGCATCACCGGCGGCGAGTTGGACGCACTCTACGACGCGATCGAGGAGGCCGCC GAACGCTTCGGGTCTAGGCC
Downstream 100 bases:
>100_bases CCGCGCGAACCGAACTGCCAAGACTGACCTTGAACGATGAATACAGGGACAACGACCAATGCGAAAACTAGTCGCCGGCA AGCTGCACGGCATCCACGTC
Product: 3-oxoacyl-(acyl carrier protein) synthase II
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSKSSRILGFGHHTPGRKVANAEIENNLGLEPGWIERRTGIRSRFWATDGDTLSGLATQAGDIALANAGIDRSDIGLLLL ATSTPDHLLPPSAPLVAHKLGLGRAGAVDLTGACAGFVYALMFADGFTRLHGKPALVIAANILSRRINPAERASSVLFAD AAGALVIGPCEDPYQGILGASVDSDGSRYGLIQIPAGGSNTPFHGELDLEQTRMTITDGREVFAKAVEMMTACSQDALAA ARMRPQDIDRFVPHQANARIFDAVGRNLGIADEAIVKTIAEYGNSSAATIPLSLSLAHRAAPFRPGEKVLLAAAGAGLSG GALVVGI
Sequences:
>Translated_327_residues MSKSSRILGFGHHTPGRKVANAEIENNLGLEPGWIERRTGIRSRFWATDGDTLSGLATQAGDIALANAGIDRSDIGLLLL ATSTPDHLLPPSAPLVAHKLGLGRAGAVDLTGACAGFVYALMFADGFTRLHGKPALVIAANILSRRINPAERASSVLFAD AAGALVIGPCEDPYQGILGASVDSDGSRYGLIQIPAGGSNTPFHGELDLEQTRMTITDGREVFAKAVEMMTACSQDALAA ARMRPQDIDRFVPHQANARIFDAVGRNLGIADEAIVKTIAEYGNSSAATIPLSLSLAHRAAPFRPGEKVLLAAAGAGLSG GALVVGI >Mature_326_residues SKSSRILGFGHHTPGRKVANAEIENNLGLEPGWIERRTGIRSRFWATDGDTLSGLATQAGDIALANAGIDRSDIGLLLLA TSTPDHLLPPSAPLVAHKLGLGRAGAVDLTGACAGFVYALMFADGFTRLHGKPALVIAANILSRRINPAERASSVLFADA AGALVIGPCEDPYQGILGASVDSDGSRYGLIQIPAGGSNTPFHGELDLEQTRMTITDGREVFAKAVEMMTACSQDALAAA RMRPQDIDRFVPHQANARIFDAVGRNLGIADEAIVKTIAEYGNSSAATIPLSLSLAHRAAPFRPGEKVLLAAAGAGLSGG ALVVGI
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=322, Percent_Identity=34.7826086956522, Blast_Score=191, Evalue=5e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 33962; Mature: 33831
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSSRILGFGHHTPGRKVANAEIENNLGLEPGWIERRTGIRSRFWATDGDTLSGLATQA CCCCCCEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCHHEECCCCCCHHHHHHCC GDIALANAGIDRSDIGLLLLATSTPDHLLPPSAPLVAHKLGLGRAGAVDLTGACAGFVYA CCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEECHHHHHHHHHH LMFADGFTRLHGKPALVIAANILSRRINPAERASSVLFADAAGALVIGPCEDPYQGILGA HHHHCCHHHHCCCCEEEEEEHHHHHCCCHHHHHCEEEEEECCCEEEECCCCCHHHHHCCC SVDSDGSRYGLIQIPAGGSNTPFHGELDLEQTRMTITDGREVFAKAVEMMTACSQDALAA CCCCCCCEEEEEEECCCCCCCCCCCEECHHHHEEEECCCHHHHHHHHHHHHHCCHHHHHH ARMRPQDIDRFVPHQANARIFDAVGRNLGIADEAIVKTIAEYGNSSAATIPLSLSLAHRA HHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHHC APFRPGEKVLLAAAGAGLSGGALVVGI CCCCCCCEEEEEEECCCCCCCEEEEEC >Mature Secondary Structure SKSSRILGFGHHTPGRKVANAEIENNLGLEPGWIERRTGIRSRFWATDGDTLSGLATQA CCCCCEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHCCCCHHEECCCCCCHHHHHHCC GDIALANAGIDRSDIGLLLLATSTPDHLLPPSAPLVAHKLGLGRAGAVDLTGACAGFVYA CCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCEECHHHHHHHHHH LMFADGFTRLHGKPALVIAANILSRRINPAERASSVLFADAAGALVIGPCEDPYQGILGA HHHHCCHHHHCCCCEEEEEEHHHHHCCCHHHHHCEEEEEECCCEEEECCCCCHHHHHCCC SVDSDGSRYGLIQIPAGGSNTPFHGELDLEQTRMTITDGREVFAKAVEMMTACSQDALAA CCCCCCCEEEEEEECCCCCCCCCCCEECHHHHEEEECCCHHHHHHHHHHHHHCCHHHHHH ARMRPQDIDRFVPHQANARIFDAVGRNLGIADEAIVKTIAEYGNSSAATIPLSLSLAHRA HHCCHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEHHHC APFRPGEKVLLAAAGAGLSGGALVVGI CCCCCCCEEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA