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The map label for this gene is panD1

Identifier: 13474851

GI number: 13474851

Start: 4699323

End: 4699775

Strand: Reverse

Name: panD1

Synonym: mll5826

Alternate gene names: 13474851

Gene position: 4699775-4699323 (Counterclockwise)

Preceding gene: 13474852

Following gene: 13474848

Centisome position: 66.8

GC content: 58.5

Gene sequence:

>453_bases
ATGCGAAAACTAGTCGCCGGCAAGCTGCACGGCATCCACGTCACAGAAGCGAACCTCAACTACCATGGTTCGATAACGCT
CGACCCCGACCACTGCGAGGCAGCCGGGATCCTGCCGATGGAATTCGTGGAGATATGGAACAAGAATTCCGGTGCGCGGA
TTTCGACCTATGTCATCCTCGGCGAGCGCGGCTCACGGTGCTGCATCCTCAACGGAGCGGCGGCTCGCACCTGTCAGCCC
GACGACCCGATTATCGTCTGCAACTCCATCTACCTGGACGAAGCGCATATCACTTCGCTGAAGCCGCGCATCGTCACGTT
CGACCAGGATAACCACATACTCGACCGCCTGAGCTACTCCGTCGATATTGACACAGACGGCCGTTACAGTTTCGCCATTC
TTGACGAGGCGGATGAGCCTTTGGTCATTCCTGCCCTGGTCTCCGGGGCGTGA

Upstream 100 bases:

>100_bases
GGTGCGGGTCTTAGCGGCGGTGCGCTCGTCGTTGGAATTTAGCCGCGCGAACCGAACTGCCAAGACTGACCTTGAACGAT
GAATACAGGGACAACGACCA

Downstream 100 bases:

>100_bases
GCCGCGCTCCACAGATGTGCGAGCCTCGGCACTGAAGAGCGTCTGGTCCAAGACTCGACGAAGTTGCTGATGCTCAGCTT
CGAAAGGCTGATGCCCACCA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase 1

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRKLVAGKLHGIHVTEANLNYHGSITLDPDHCEAAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
DDPIIVCNSIYLDEAHITSLKPRIVTFDQDNHILDRLSYSVDIDTDGRYSFAILDEADEPLVIPALVSGA

Sequences:

>Translated_150_residues
MRKLVAGKLHGIHVTEANLNYHGSITLDPDHCEAAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
DDPIIVCNSIYLDEAHITSLKPRIVTFDQDNHILDRLSYSVDIDTDGRYSFAILDEADEPLVIPALVSGA
>Mature_150_residues
MRKLVAGKLHGIHVTEANLNYHGSITLDPDHCEAAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
DDPIIVCNSIYLDEAHITSLKPRIVTFDQDNHILDRLSYSVDIDTDGRYSFAILDEADEPLVIPALVSGA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=39.8230088495575, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND1_RHILO (Q9EYU1)

Other databases:

- EMBL:   AF311738
- EMBL:   BA000012
- RefSeq:   NP_106421.1
- ProteinModelPortal:   Q9EYU1
- SMR:   Q9EYU1
- GeneID:   1229080
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll5826
- NMPDR:   fig|266835.1.peg.4524
- HOGENOM:   HBG302821
- OMA:   DLNYHGS
- ProtClustDB:   PRK05449
- BRENDA:   4.1.1.11
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 16449; Mature: 16449

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: ACT_SITE 24-24 ACT_SITE 57-57 BINDING 56-56

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLVAGKLHGIHVTEANLNYHGSITLDPDHCEAAGILPMEFVEIWNKNSGARISTYVIL
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
GERGSRCCILNGAAARTCQPDDPIIVCNSIYLDEAHITSLKPRIVTFDQDNHILDRLSYS
CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEEECCCCEEHHEEEE
VDIDTDGRYSFAILDEADEPLVIPALVSGA
EEECCCCCEEEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure
MRKLVAGKLHGIHVTEANLNYHGSITLDPDHCEAAGILPMEFVEIWNKNSGARISTYVIL
CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
GERGSRCCILNGAAARTCQPDDPIIVCNSIYLDEAHITSLKPRIVTFDQDNHILDRLSYS
CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCEECCCCCEEEEEECCCCEEHHEEEE
VDIDTDGRYSFAILDEADEPLVIPALVSGA
EEECCCCCEEEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968