| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is mrp [H]
Identifier: 13474504
GI number: 13474504
Start: 4317321
End: 4318490
Strand: Direct
Name: mrp [H]
Synonym: mlr5402
Alternate gene names: 13474504
Gene position: 4317321-4318490 (Clockwise)
Preceding gene: 13474502
Following gene: 13474506
Centisome position: 61.36
GC content: 66.41
Gene sequence:
>1170_bases ATGTCCGTCACCAAGGAAATCGTCACCGAGCGCCTGAAGACGGTCAACGGGCCGGACTTCACCGGCAACATCGTCGATCT CGGCATGGTTTCGGAGATTTTCATCGCCGATTCGAAAGTGTTCTTCTCGATCACCGTTCCCGCCGCCAGGGCACAGGAAA TGGAGCCACTGCGCGCCGCCGCCGAGCGAGTGGTGAAGGCAATTCCCGGCGTCGCCGGCGCCGTCGTCGCACTGACGGCG GAGAAAAAGGGCGGCGGCATGGAGGCGCCGGTGCCCGCGCGCCCCGCACCCAGGCCGGCACCGCCGGCGACCCCCCAGCG TCCCGCGCCGCAGGCGCCGGCCTCGCACAGCTCGGGCAAGCGTGGCGTGCCCGGCATCGAGGCGATTATCGCGGTTGCCT CGGGCAAAGGCGGTGTCGGCAAGTCGACCACCGCCGTTAATCTGGCGCTTGGCCTTGCCGCCAACGGCTTGCGGGTCGGC GTGCTCGATGCCGACATTTACGGCCCGTCCATGCCGAAGCTGCTCAATATCCACGGCCGGCCGCAGACGGTCGACGGCAA GATCCTGAAACCGATGGAGAATTACGGCCTCAAGGTGATGTCGATGGGCTTCCTCGTCGATGAGGAGACGCCGATGATCT GGCGTGGGCCGATGGTGATGTCGGCGCTGACCCAGATGCTGCGCGAGGTCGAATGGGGCCGGCTCGACGTGCTCGTCGTC GATATGCCGCCCGGCACCGGCGACGCGCAGCTGACCATGGCCCAGCAGGTGCCGCTGGCCGGCGCCGTCATCGTCTCGAC GCCGCAGGATCTGGCGCTGATCGATGCCCGCAAGGGGCTGAACATGTTCAAGAAGGTCGACGTGCCGCTGCTCGGCATTG TCGAGAATATGAGCTATTTCATCGCGCCCGACACCGGCAAGCGCTACGACATTTTCGGCCATGGCGGCGCGCGCCGCGAG GCCGAGCGCCTCGGCGTCACCTTCCTCGGCGAAGTGCCGCTGGAAATGGGCATCCGCGAAAGCTCGGATGCCGGGACGCC GGTGGTTGTGTCGAAGCCCGATAGCGCCGAAGCGAAAATCTATCGCGACATCGCCGCCAAGGTCTGGGACAGGGTCAATG AGGAACGCGGCGCCGCCGAAGCGGCGGTGCCGAGCATCGTCTTCGAGTGA
Upstream 100 bases:
>100_bases ATCGGTCGTTTTCCGCGGCACGCCGGGCAAGCCTTTGCGTCACGGCTTGGTTCTCGTTGGAAACTGCACTATCTGCATGG CCAAACGCCGAGGAAAGATC
Downstream 100 bases:
>100_bases ACCCTCGGGGACGGCTCAGCCGCCGACCTTCTCGCCGAAGCTGGAAAAGAACTGCCCAGCCAGTTTTTTCGACGTGGACT CGATCAGCCGGCTGCCGAGC
Product: ATP/GTP-binding-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSVTKEIVTERLKTVNGPDFTGNIVDLGMVSEIFIADSKVFFSITVPAARAQEMEPLRAAAERVVKAIPGVAGAVVALTA EKKGGGMEAPVPARPAPRPAPPATPQRPAPQAPASHSSGKRGVPGIEAIIAVASGKGGVGKSTTAVNLALGLAANGLRVG VLDADIYGPSMPKLLNIHGRPQTVDGKILKPMENYGLKVMSMGFLVDEETPMIWRGPMVMSALTQMLREVEWGRLDVLVV DMPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLNMFKKVDVPLLGIVENMSYFIAPDTGKRYDIFGHGGARRE AERLGVTFLGEVPLEMGIRESSDAGTPVVVSKPDSAEAKIYRDIAAKVWDRVNEERGAAEAAVPSIVFE
Sequences:
>Translated_389_residues MSVTKEIVTERLKTVNGPDFTGNIVDLGMVSEIFIADSKVFFSITVPAARAQEMEPLRAAAERVVKAIPGVAGAVVALTA EKKGGGMEAPVPARPAPRPAPPATPQRPAPQAPASHSSGKRGVPGIEAIIAVASGKGGVGKSTTAVNLALGLAANGLRVG VLDADIYGPSMPKLLNIHGRPQTVDGKILKPMENYGLKVMSMGFLVDEETPMIWRGPMVMSALTQMLREVEWGRLDVLVV DMPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLNMFKKVDVPLLGIVENMSYFIAPDTGKRYDIFGHGGARRE AERLGVTFLGEVPLEMGIRESSDAGTPVVVSKPDSAEAKIYRDIAAKVWDRVNEERGAAEAAVPSIVFE >Mature_388_residues SVTKEIVTERLKTVNGPDFTGNIVDLGMVSEIFIADSKVFFSITVPAARAQEMEPLRAAAERVVKAIPGVAGAVVALTAE KKGGGMEAPVPARPAPRPAPPATPQRPAPQAPASHSSGKRGVPGIEAIIAVASGKGGVGKSTTAVNLALGLAANGLRVGV LDADIYGPSMPKLLNIHGRPQTVDGKILKPMENYGLKVMSMGFLVDEETPMIWRGPMVMSALTQMLREVEWGRLDVLVVD MPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLNMFKKVDVPLLGIVENMSYFIAPDTGKRYDIFGHGGARREA ERLGVTFLGEVPLEMGIRESSDAGTPVVVSKPDSAEAKIYRDIAAKVWDRVNEERGAAEAAVPSIVFE
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=260, Percent_Identity=55.7692307692308, Blast_Score=293, Evalue=2e-79, Organism=Homo sapiens, GI118572611, Length=276, Percent_Identity=39.4927536231884, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI6912540, Length=254, Percent_Identity=37.7952755905512, Blast_Score=167, Evalue=1e-41, Organism=Escherichia coli, GI87082045, Length=248, Percent_Identity=56.0483870967742, Blast_Score=276, Evalue=1e-75, Organism=Caenorhabditis elegans, GI25143050, Length=288, Percent_Identity=36.8055555555556, Blast_Score=171, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6322188, Length=266, Percent_Identity=37.9699248120301, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321347, Length=280, Percent_Identity=35, Blast_Score=161, Evalue=1e-40, Organism=Drosophila melanogaster, GI221511043, Length=257, Percent_Identity=43.579766536965, Blast_Score=238, Evalue=7e-63, Organism=Drosophila melanogaster, GI24667611, Length=250, Percent_Identity=41.2, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI19921440, Length=253, Percent_Identity=37.1541501976285, Blast_Score=137, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 41070; Mature: 40939
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTKEIVTERLKTVNGPDFTGNIVDLGMVSEIFIADSKVFFSITVPAARAQEMEPLRAA CCCHHHHHHHHHHHCCCCCCCCCEEECCHHEEEEEECCEEEEEEECCCHHHHHCCHHHHH AERVVKAIPGVAGAVVALTAEKKGGGMEAPVPARPAPRPAPPATPQRPAPQAPASHSSGK HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGVPGIEAIIAVASGKGGVGKSTTAVNLALGLAANGLRVGVLDADIYGPSMPKLLNIHGR CCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCC PQTVDGKILKPMENYGLKVMSMGFLVDEETPMIWRGPMVMSALTQMLREVEWGRLDVLVV CCCCCCCEECCHHHCCEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEE DMPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLNMFKKVDVPLLGIVENMSYF ECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECHHCCHHHHHCCCCCEEHHCCCEEE IAPDTGKRYDIFGHGGARREAERLGVTFLGEVPLEMGIRESSDAGTPVVVSKPDSAEAKI EECCCCCEEEEEECCCCHHHHHHCCEEEEECCCHHCCCCCCCCCCCEEEEECCCCCHHHH YRDIAAKVWDRVNEERGAAEAAVPSIVFE HHHHHHHHHHHHHHHCCCHHHHCCHHCCC >Mature Secondary Structure SVTKEIVTERLKTVNGPDFTGNIVDLGMVSEIFIADSKVFFSITVPAARAQEMEPLRAA CCHHHHHHHHHHHCCCCCCCCCEEECCHHEEEEEECCEEEEEEECCCHHHHHCCHHHHH AERVVKAIPGVAGAVVALTAEKKGGGMEAPVPARPAPRPAPPATPQRPAPQAPASHSSGK HHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RGVPGIEAIIAVASGKGGVGKSTTAVNLALGLAANGLRVGVLDADIYGPSMPKLLNIHGR CCCCCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCC PQTVDGKILKPMENYGLKVMSMGFLVDEETPMIWRGPMVMSALTQMLREVEWGRLDVLVV CCCCCCCEECCHHHCCEEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEE DMPPGTGDAQLTMAQQVPLAGAVIVSTPQDLALIDARKGLNMFKKVDVPLLGIVENMSYF ECCCCCCCCEEEEECCCCCCCEEEEECCCCEEEEECHHCCHHHHHCCCCCEEHHCCCEEE IAPDTGKRYDIFGHGGARREAERLGVTFLGEVPLEMGIRESSDAGTPVVVSKPDSAEAKI EECCCCCEEEEEECCCCHHHHHHCCEEEEECCCHHCCCCCCCCCCCEEEEECCCCCHHHH YRDIAAKVWDRVNEERGAAEAAVPSIVFE HHHHHHHHHHHHHHHCCCHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]