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The map label for this gene is xylB [H]

Identifier: 13474197

GI number: 13474197

Start: 3983930

End: 3985384

Strand: Direct

Name: xylB [H]

Synonym: mlr5033

Alternate gene names: 13474197

Gene position: 3983930-3985384 (Clockwise)

Preceding gene: 13474196

Following gene: 13474199

Centisome position: 56.62

GC content: 66.53

Gene sequence:

>1455_bases
ATGTATCTCGGCCTCGACCTAGGCACGTCGGGCGTCAAGGCGCTGCTGATCGATGCCGGACAGACCGTCGTCGGTTCCGG
CCACGGCTCGCTTGACGTTTCGCGGCCGCATCCCGGCTGGTCCGAACAGGACCCGTCCCACTGGATACGCGCCTGCGAAG
ACGCGATCGCAGAACTGAAGGCCTCTCATCCCAGGCAGTTCGCGGCGGTGAAGGGCATCGGCCTGTCCGGCCAGATGCAC
GGCGCCACCTTGCTCGATGCGGCTGATCATGTGCTGCGCCCCTGCATCCTGTGGAACGACACGCGCAGCCATGTCGAGGC
AGCAGTGCTCGACGCCGATCCACGCTTCCGCAAGTTGACCGGCAACATCGTCTTCCCCGGCTTCACCGCGCCCAAGCTCG
CCTGGGTGAAGAACAACGAACCCGCCGTCTTCGCCAAAGTGGCGAAGGTGCTGCTGCCGAAGGATTTCCTGCGGCTATGG
CTCACCGGCGAGCACATTTCCGAAATGTCCGACTCCGCGGGCACGTCCTGGCTCGACGTCGGCAAGCGCCGCTGGTCGGC
CGAATTGCTGGCGGCTACGTCGCTCGACGAGAAGCAGATGCCGTCCCTGGTCGAGGGCACTGAGAAGGCTGGCGGTTTGC
GCGCCGAACTGGCGTCGAAATGGGGCGTCGAGGCCGGCATCCCGGTTGCCGGCGGCGCCGGCGACAATGCTGCCTCGGCC
TGCGGCATGGGCACGGTCGGCGCCGGCCATGCGTTTGTCTCTCTCGGCACCTCTGGCGTGCTGTTTGCCGCCAACGCGTC
CTATCTGCCCAACCCGGCGAGTGCTGTCCACACCTTCTGTCATGCGCTGCCCGACACCTGGCACCAGATGGGTGTCATCC
TGTCGGCAACCGATTCGCTCAACTGGCTGTCGGAGATCACTGGAAAGGGCGCGGGTGAACTGACCGCTGAACTCGGCGAT
ACGCTGAAGGCGCCGACCGGCGTGTCTTTCCTGCCCTACCTCTCGGGCGAGCGCACGCCGCACAATGATTCGGCCATTCG
CGGCTCCTTCACCGGCCTGGCGCATGAATCGAGCCGCGCAGTGCTGACGCAGGCTGTGCTCGAGGGCGTCGCCTTCGCCT
TCCGCGATAGTCTCGAAGCCCTGAAGACCGCCGGCACCACATTGACACGGGTGACGGCGATCGGCGGCGGCTCACGCTCG
CGCTACTGGCTGAAATCGATCGCCACCGCGCTGCAAGTGCCGGTGGACATTCCCGCCGACGGTGATTTCGGCGCCGCCTT
CGGCGCTGCCAGGCTCGGTCTGATCGCGGCGACGGGTGCCGATCCGCTGGCCGTCTGCTCCGCGCCAAGGACGGATGCCA
CGATCGAACCGGATGCCAAGCTCGGCGGCGCCTATGCGGACGCCTATCATCGCTACCGGGCGCTCTATCCGGCAATCAGG
GGTGCCACGGCGTGA

Upstream 100 bases:

>100_bases
GATTTGTCAGAGAATTGACCGCAAGCCGATCTTGCCTTAAAAACTGGCTCGGCCAGATTTTTTCGAGACCCGAAAAAAAT
AAATGGCATGGGAGGATGAC

Downstream 100 bases:

>100_bases
ACGATTTCTCGCCCACGCCGCGACTTCCGGCCTCACTGCGCCGGAACCTTGTCGAGGAAGCCGGTGATGCTCTTCAGGCG
GCCGTTTTCGATGATACCGA

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MYLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELKASHPRQFAAVKGIGLSGQMH
GATLLDAADHVLRPCILWNDTRSHVEAAVLDADPRFRKLTGNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLW
LTGEHISEMSDSAGTSWLDVGKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA
CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSLNWLSEITGKGAGELTAELGD
TLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESSRAVLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRS
RYWLKSIATALQVPVDIPADGDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPAIR
GATA

Sequences:

>Translated_484_residues
MYLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELKASHPRQFAAVKGIGLSGQMH
GATLLDAADHVLRPCILWNDTRSHVEAAVLDADPRFRKLTGNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLW
LTGEHISEMSDSAGTSWLDVGKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA
CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSLNWLSEITGKGAGELTAELGD
TLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESSRAVLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRS
RYWLKSIATALQVPVDIPADGDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPAIR
GATA
>Mature_484_residues
MYLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELKASHPRQFAAVKGIGLSGQMH
GATLLDAADHVLRPCILWNDTRSHVEAAVLDADPRFRKLTGNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLW
LTGEHISEMSDSAGTSWLDVGKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA
CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSLNWLSEITGKGAGELTAELGD
TLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESSRAVLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRS
RYWLKSIATALQVPVDIPADGDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPAIR
GATA

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=442, Percent_Identity=22.6244343891403, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI189409120, Length=442, Percent_Identity=22.6244343891403, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI4504007, Length=442, Percent_Identity=22.6244343891403, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI41393575, Length=443, Percent_Identity=22.5733634311512, Blast_Score=92, Evalue=8e-19,
Organism=Homo sapiens, GI88196792, Length=497, Percent_Identity=22.1327967806841, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI18860918, Length=511, Percent_Identity=25.8317025440313, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI1789987, Length=480, Percent_Identity=48.75, Blast_Score=413, Evalue=1e-116,
Organism=Escherichia coli, GI1790005, Length=497, Percent_Identity=26.5593561368209, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1789168, Length=491, Percent_Identity=23.6252545824847, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1790361, Length=497, Percent_Identity=21.1267605633803, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787789, Length=506, Percent_Identity=22.1343873517787, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17535599, Length=424, Percent_Identity=25.2358490566038, Blast_Score=101, Evalue=1e-21,
Organism=Saccharomyces cerevisiae, GI6321633, Length=347, Percent_Identity=25.0720461095101, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI17864214, Length=442, Percent_Identity=23.9819004524887, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24655555, Length=446, Percent_Identity=24.8878923766816, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24655560, Length=446, Percent_Identity=24.8878923766816, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24655570, Length=446, Percent_Identity=24.8878923766816, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24655574, Length=446, Percent_Identity=24.8878923766816, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24655565, Length=446, Percent_Identity=24.8878923766816, Blast_Score=96, Evalue=7e-20,
Organism=Drosophila melanogaster, GI21356607, Length=545, Percent_Identity=22.5688073394495, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24654573, Length=366, Percent_Identity=24.3169398907104, Blast_Score=85, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 50476; Mature: 50476

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00933 FGGY_KINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELK
CEEEEECCCCCCEEEEEECCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ASHPRQFAAVKGIGLSGQMHGATLLDAADHVLRPCILWNDTRSHVEAAVLDADPRFRKLT
HCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHEEEEECCCCCHHEEE
GNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLWLTGEHISEMSDSAGTSWLDV
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCCCHHHHH
GKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA
HHHHHHHHHHHHCCCCHHHCCHHHHCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHH
CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSL
CCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCEEEECCCCH
NWLSEITGKGAGELTAELGDTLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESSRA
HHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRSRYWLKSIATALQVPVDIPAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
GDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPAIR
CCCCHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHC
GATA
CCCC
>Mature Secondary Structure
MYLGLDLGTSGVKALLIDAGQTVVGSGHGSLDVSRPHPGWSEQDPSHWIRACEDAIAELK
CEEEEECCCCCCEEEEEECCCEEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
ASHPRQFAAVKGIGLSGQMHGATLLDAADHVLRPCILWNDTRSHVEAAVLDADPRFRKLT
HCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCHHHHEEEEECCCCCHHEEE
GNIVFPGFTAPKLAWVKNNEPAVFAKVAKVLLPKDFLRLWLTGEHISEMSDSAGTSWLDV
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHCCCHHHHH
GKRRWSAELLAATSLDEKQMPSLVEGTEKAGGLRAELASKWGVEAGIPVAGGAGDNAASA
HHHHHHHHHHHHCCCCHHHCCHHHHCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHH
CGMGTVGAGHAFVSLGTSGVLFAANASYLPNPASAVHTFCHALPDTWHQMGVILSATDSL
CCCCCCCCCCEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHCEEEECCCCH
NWLSEITGKGAGELTAELGDTLKAPTGVSFLPYLSGERTPHNDSAIRGSFTGLAHESSRA
HHHHHHHCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
VLTQAVLEGVAFAFRDSLEALKTAGTTLTRVTAIGGGSRSRYWLKSIATALQVPVDIPAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCC
GDFGAAFGAARLGLIAATGADPLAVCSAPRTDATIEPDAKLGGAYADAYHRYRALYPAIR
CCCCHHHHHHHHHEEEECCCCCCEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHC
GATA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]