| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474196
Identifier: 13474196
GI number: 13474196
Start: 3982525
End: 3983847
Strand: Direct
Name: 13474196
Synonym: mlr5032
Alternate gene names: NA
Gene position: 3982525-3983847 (Clockwise)
Preceding gene: 13474194
Following gene: 13474197
Centisome position: 56.6
GC content: 66.59
Gene sequence:
>1323_bases ATGGCAATCAGGGACGCATTCGGCCTGACATTTTCGGGCGCCACCGAAACCGGGTTCACGCCCTACAGCCAGGCCGTGCG TGAACTGTTGTGCTTCATCGGCGATCCCGTCGCCTCCGTCGACCGTGCCATATTGGCGGATCCCGGTTTCGTCATGGCGC ATGTCTTCAAGGGCTATCTCTTCGGCCTCGCCACCGAGCGCGATGCAACGGCGGTGGCCAGGGCTTGCCACGAGGCGGCG CTGCCGCTTGCCGCGACGACGCGCGAAGAGGCGCATGTTCTGGCCCTCGGCCACCTCGCCAATGGGCGCTGGCATGACGC CGCCAGGATCCTCGAGGATGTCGCCATCGAGACCCCGCTCGACGCGCTGGCGCTGCAGGTCGGGCACCAGATCGACTTCT TCACAGGCAATGCGCGAATGCTGCGTGACCGCATCGCCCGCGCCTTGCCGTCATGGCAGAGCGGCATGCCGGGCTACCAC GCCATCCTCGGCATGCAGGCCTTCGGGCTGGAGGAAATGGGCGACTATACCAGGGCCGAAAAGCTTGGTCGCACGGCGGT CGAGATCGAGCCGCGCGATGGCTGGGCGCAGCATGCGGTCGCGCATGTCATGGAAATGCAAAGCCGGCAAAGGGACGGTA TCGTCTGGATGCGCGCCAATCCCGAAGCCTGGACAAAGGAAAGCTTCCTGCAGGTGCACAATTGGTGGCACTTGGCGCTG TTCCACTACGATCTCGGTGAGATCGACCAGGTGCTGGCGCTCTATGACGGACCGATCTATGGCGCGCCATCGGCGATGGC GCTGAACATGGTCGATGCGTCGGCGCTCCTGTGGCGGCTGCATCTCGGCGGCATCGATGTCGGCGACCGCTGGGCGGCGC TCGCCGCCAATTGGCCCAAGGCCGGCGCCGGCGATTATGCCTTCAACGATGCGCATGCGATGATGGCCTTCGTCGGCGCC GGCCTCGACGGACCCGCCCTTGCCTTGCTCGAGGCGCAGCGCGAGGCGATGCACGGCAGCGGCGACAACGCCGCTTTCAC GCGGGATGTCGGCCATCCGCTGACGCTGGCAATCAAGGCATTCGGCGAGGCCAACTACACCGAGGCCGTGCAGCTGATCC GGCCGATCCGGGCGATCGCCAATCGCTTCGGCGGCAGCCACGCGCAGCGCGACGTCATCGACCTGACGCTGATCGAAGCG GCCTTGCGGGCCGGTGACCGCGCGCTCGCCGGGGCGCTCACGGCCGAGCGTTCGATGGCGCGGCCGGATAGCCCGCTCTC TGTGCTGCTTGCGCGACGCGCGGCCGATTTGTCAGAGAATTGA
Upstream 100 bases:
>100_bases CCTTATGCAGTGCGTGATTGGCACGTCCGTGGCCCATGATTTAAGATCGCCTTGGCCTGAAGGGCCGCGAGCTTGTCCAA GGTCGATCAGAGGATGTTGC
Downstream 100 bases:
>100_bases CCGCAAGCCGATCTTGCCTTAAAAACTGGCTCGGCCAGATTTTTTCGAGACCCGAAAAAAATAAATGGCATGGGAGGATG ACATGTATCTCGGCCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MAIRDAFGLTFSGATETGFTPYSQAVRELLCFIGDPVASVDRAILADPGFVMAHVFKGYLFGLATERDATAVARACHEAA LPLAATTREEAHVLALGHLANGRWHDAARILEDVAIETPLDALALQVGHQIDFFTGNARMLRDRIARALPSWQSGMPGYH AILGMQAFGLEEMGDYTRAEKLGRTAVEIEPRDGWAQHAVAHVMEMQSRQRDGIVWMRANPEAWTKESFLQVHNWWHLAL FHYDLGEIDQVLALYDGPIYGAPSAMALNMVDASALLWRLHLGGIDVGDRWAALAANWPKAGAGDYAFNDAHAMMAFVGA GLDGPALALLEAQREAMHGSGDNAAFTRDVGHPLTLAIKAFGEANYTEAVQLIRPIRAIANRFGGSHAQRDVIDLTLIEA ALRAGDRALAGALTAERSMARPDSPLSVLLARRAADLSEN
Sequences:
>Translated_440_residues MAIRDAFGLTFSGATETGFTPYSQAVRELLCFIGDPVASVDRAILADPGFVMAHVFKGYLFGLATERDATAVARACHEAA LPLAATTREEAHVLALGHLANGRWHDAARILEDVAIETPLDALALQVGHQIDFFTGNARMLRDRIARALPSWQSGMPGYH AILGMQAFGLEEMGDYTRAEKLGRTAVEIEPRDGWAQHAVAHVMEMQSRQRDGIVWMRANPEAWTKESFLQVHNWWHLAL FHYDLGEIDQVLALYDGPIYGAPSAMALNMVDASALLWRLHLGGIDVGDRWAALAANWPKAGAGDYAFNDAHAMMAFVGA GLDGPALALLEAQREAMHGSGDNAAFTRDVGHPLTLAIKAFGEANYTEAVQLIRPIRAIANRFGGSHAQRDVIDLTLIEA ALRAGDRALAGALTAERSMARPDSPLSVLLARRAADLSEN >Mature_439_residues AIRDAFGLTFSGATETGFTPYSQAVRELLCFIGDPVASVDRAILADPGFVMAHVFKGYLFGLATERDATAVARACHEAAL PLAATTREEAHVLALGHLANGRWHDAARILEDVAIETPLDALALQVGHQIDFFTGNARMLRDRIARALPSWQSGMPGYHA ILGMQAFGLEEMGDYTRAEKLGRTAVEIEPRDGWAQHAVAHVMEMQSRQRDGIVWMRANPEAWTKESFLQVHNWWHLALF HYDLGEIDQVLALYDGPIYGAPSAMALNMVDASALLWRLHLGGIDVGDRWAALAANWPKAGAGDYAFNDAHAMMAFVGAG LDGPALALLEAQREAMHGSGDNAAFTRDVGHPLTLAIKAFGEANYTEAVQLIRPIRAIANRFGGSHAQRDVIDLTLIEAA LRAGDRALAGALTAERSMARPDSPLSVLLARRAADLSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI116812608, Length=405, Percent_Identity=34.8148148148148, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI32564653, Length=446, Percent_Identity=32.0627802690583, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17537551, Length=444, Percent_Identity=29.0540540540541, Blast_Score=177, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47676; Mature: 47544
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIRDAFGLTFSGATETGFTPYSQAVRELLCFIGDPVASVDRAILADPGFVMAHVFKGYL CCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH FGLATERDATAVARACHEAALPLAATTREEAHVLALGHLANGRWHDAARILEDVAIETPL HHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCH DALALQVGHQIDFFTGNARMLRDRIARALPSWQSGMPGYHAILGMQAFGLEEMGDYTRAE HHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCHHHHHHHHHHH KLGRTAVEIEPRDGWAQHAVAHVMEMQSRQRDGIVWMRANPEAWTKESFLQVHNWWHLAL HHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCEEEEEE FHYDLGEIDQVLALYDGPIYGAPSAMALNMVDASALLWRLHLGGIDVGDRWAALAANWPK EECCHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC AGAGDYAFNDAHAMMAFVGAGLDGPALALLEAQREAMHGSGDNAAFTRDVGHPLTLAIKA CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEH FGEANYTEAVQLIRPIRAIANRFGGSHAQRDVIDLTLIEAALRAGDRALAGALTAERSMA HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC RPDSPLSVLLARRAADLSEN CCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AIRDAFGLTFSGATETGFTPYSQAVRELLCFIGDPVASVDRAILADPGFVMAHVFKGYL CCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHH FGLATERDATAVARACHEAALPLAATTREEAHVLALGHLANGRWHDAARILEDVAIETPL HHCCCCCHHHHHHHHHHHHCCCCHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCH DALALQVGHQIDFFTGNARMLRDRIARALPSWQSGMPGYHAILGMQAFGLEEMGDYTRAE HHHHHHHCCEEEEEECCHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHCHHHHHHHHHHH KLGRTAVEIEPRDGWAQHAVAHVMEMQSRQRDGIVWMRANPEAWTKESFLQVHNWWHLAL HHCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCEEEEEE FHYDLGEIDQVLALYDGPIYGAPSAMALNMVDASALLWRLHLGGIDVGDRWAALAANWPK EECCHHHHHHHHHHHCCCCCCCCCHHEEHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCC AGAGDYAFNDAHAMMAFVGAGLDGPALALLEAQREAMHGSGDNAAFTRDVGHPLTLAIKA CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEH FGEANYTEAVQLIRPIRAIANRFGGSHAQRDVIDLTLIEAALRAGDRALAGALTAERSMA HCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC RPDSPLSVLLARRAADLSEN CCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA