| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474181
Identifier: 13474181
GI number: 13474181
Start: 3971163
End: 3971639
Strand: Direct
Name: 13474181
Synonym: mlr5010
Alternate gene names: NA
Gene position: 3971163-3971639 (Clockwise)
Preceding gene: 13474180
Following gene: 13474182
Centisome position: 56.44
GC content: 66.88
Gene sequence:
>477_bases ATGGCCACCTATGTCGTGATGGAACCGCCCAGCCGCAGCGAAAAGGTCGATGCAACGGCCTTTGTCCGCGACGGCTTCAC CTGGCTCGGCCTGCTGGTACCGCCGCTATGGCTCGCCTGGCATCGGCTGTGGATCGAGGCCGGACTTGCCTTCGTCGTCA TGGGCCTGCTTTCGATGGCTGGGGAAAACCTTGGCCTCGGATTGGCAAGTTCACTGCTGTCGCTCCTGGTTTCGTTCTAT ATCGGCCTGGAAGGGCAGGGGTTGCGCATCGCGGCCCTGCGCCGGCGCGGCTGGCATGAATGGGGCGTGGTTCAGGCCGG CCGGCTCGACGATGCCGACATTCGCTATGCGCTGGAGGTCGAGGCGCATGGGGACAACACCACACCCGCGCCGCGCATCG TTCCGGATGCCGCCCTGGCGCGCCGGGCGCAGCCGGGCATAGCGCTGGGCCTGACCCACATACCGGGACGGCCCTGA
Upstream 100 bases:
>100_bases CTTCAAGGCGGTGGCGCGCGCGTTGCGTGCCGCGCTCGAGCCCGACCCGCGCCAGCCGGACGCGGTTCCCTCCACCAAGG GATCGTTGAAGGGATAGGCC
Downstream 100 bases:
>100_bases CATGCGGGTAGCAATCATCGACTACGGCTCGGGCAATCTGCGCTCGGCCACCAAGGCCTTCGAGCGCGCCGCGCGCGAAG GAGGCATATCGGCCGAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MATYVVMEPPSRSEKVDATAFVRDGFTWLGLLVPPLWLAWHRLWIEAGLAFVVMGLLSMAGENLGLGLASSLLSLLVSFY IGLEGQGLRIAALRRRGWHEWGVVQAGRLDDADIRYALEVEAHGDNTTPAPRIVPDAALARRAQPGIALGLTHIPGRP
Sequences:
>Translated_158_residues MATYVVMEPPSRSEKVDATAFVRDGFTWLGLLVPPLWLAWHRLWIEAGLAFVVMGLLSMAGENLGLGLASSLLSLLVSFY IGLEGQGLRIAALRRRGWHEWGVVQAGRLDDADIRYALEVEAHGDNTTPAPRIVPDAALARRAQPGIALGLTHIPGRP >Mature_157_residues ATYVVMEPPSRSEKVDATAFVRDGFTWLGLLVPPLWLAWHRLWIEAGLAFVVMGLLSMAGENLGLGLASSLLSLLVSFYI GLEGQGLRIAALRRRGWHEWGVVQAGRLDDADIRYALEVEAHGDNTTPAPRIVPDAALARRAQPGIALGLTHIPGRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17173; Mature: 17042
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATYVVMEPPSRSEKVDATAFVRDGFTWLGLLVPPLWLAWHRLWIEAGLAFVVMGLLSMA CCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GENLGLGLASSLLSLLVSFYIGLEGQGLRIAALRRRGWHEWGVVQAGRLDDADIRYALEV CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCEECCCCCCCCEEEEEEE EAHGDNTTPAPRIVPDAALARRAQPGIALGLTHIPGRP EECCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure ATYVVMEPPSRSEKVDATAFVRDGFTWLGLLVPPLWLAWHRLWIEAGLAFVVMGLLSMA CEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GENLGLGLASSLLSLLVSFYIGLEGQGLRIAALRRRGWHEWGVVQAGRLDDADIRYALEV CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCEECCCCCCCCEEEEEEE EAHGDNTTPAPRIVPDAALARRAQPGIALGLTHIPGRP EECCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA