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The map label for this gene is ugpA [C]

Identifier: 13474105

GI number: 13474105

Start: 3899319

End: 3900191

Strand: Direct

Name: ugpA [C]

Synonym: mlr4912

Alternate gene names: 13474105

Gene position: 3899319-3900191 (Clockwise)

Preceding gene: 13474104

Following gene: 13474106

Centisome position: 55.42

GC content: 62.31

Gene sequence:

>873_bases
ATGCCCATGGCCCGACGCACGTCGCTCCCCGTCACCTTCGTCGTTCCGACCATCGCCATCCTCTTGGTGCTGTCGATGGT
GCCGACGCTCTACGCCATTGTCATCGCCTTGCAGAATCGCGAGCTGAGCACGCCCGATTATTCCTGGGTCTGGCTGTCGA
ACTTCGTCGACCTGTTCCTCGACCGCCGCTTCCTCAACGCGGTCTGGGTGTCGGTGAAGTGGGAGATCGTCACCGTGGTC
GCCACCATGGTGGTGGCGATCGGGCTCGGCGTGCTGATGTTCGAGGTCGCCAGCCCACGCCTGCGCAATGTCTACTGCCT
GCTCTTCATCATCCCGGTGCTGTTGCCGCGCGTGTCGGCGGCTTTCGTCTGGAAGTTCGCCTATCACCCGCTCTACGGCA
TCGCTACCTATCCCTACAGGCTCGTCACCGGCGGGCTGATCTTCGACCCGCTATCCAAGCCCGGGACGGCCTTGTTCGCC
GTTGCGTCGGTCGATGTCTGGCAATGGGGGCTGTTCTTCGCCGTCATCGTGCTGAAGCTGCTCGAAACCCTGCCGCCGCA
GCCGATCGAGGCGGCGCGGCTTGACCACGCCAAACGCTGGCAGATCCACGCCTACGTCACCTTGCCGATGCTGAAGGCGC
CGTTGATCAGCCTGATGTTCGTCAAGATGATCGAATCGTTGCGCTCCTTCGACCTGATCTATGTCATGACCCGCGGCGGA
CCGGGCGTCGCCACCGAGACGCTCGACATGTACGCCTTCTCGCAAGGCTTCATCGAATCCGGCAAGGTCTCCTATGCCTC
GGCCATGGCCGTACTGATGATGATCGCCACCGTCATCACCTTCACCATGCTGTGGAAGCGGGTGCAGGCATGA

Upstream 100 bases:

>100_bases
CGGTCCGCGGCATTGTACGCAATGCCGGGACCTGCGCGCCGCGGGGACTTTGCCGAACGAGGAAATCATGCCGACACGAT
CGAGACGCAAGCGAGGATAG

Downstream 100 bases:

>100_bases
GGCCCGGCAGACTGATCGGCAAGGCAACATTGGCGCTGGCTGGGTTCCTGGCGGTGTTTCCGCTGCTGTGGACGGCGCTC
AATGCGCTGAAGAACAATGT

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPMARRTSLPVTFVVPTIAILLVLSMVPTLYAIVIALQNRELSTPDYSWVWLSNFVDLFLDRRFLNAVWVSVKWEIVTVV
ATMVVAIGLGVLMFEVASPRLRNVYCLLFIIPVLLPRVSAAFVWKFAYHPLYGIATYPYRLVTGGLIFDPLSKPGTALFA
VASVDVWQWGLFFAVIVLKLLETLPPQPIEAARLDHAKRWQIHAYVTLPMLKAPLISLMFVKMIESLRSFDLIYVMTRGG
PGVATETLDMYAFSQGFIESGKVSYASAMAVLMMIATVITFTMLWKRVQA

Sequences:

>Translated_290_residues
MPMARRTSLPVTFVVPTIAILLVLSMVPTLYAIVIALQNRELSTPDYSWVWLSNFVDLFLDRRFLNAVWVSVKWEIVTVV
ATMVVAIGLGVLMFEVASPRLRNVYCLLFIIPVLLPRVSAAFVWKFAYHPLYGIATYPYRLVTGGLIFDPLSKPGTALFA
VASVDVWQWGLFFAVIVLKLLETLPPQPIEAARLDHAKRWQIHAYVTLPMLKAPLISLMFVKMIESLRSFDLIYVMTRGG
PGVATETLDMYAFSQGFIESGKVSYASAMAVLMMIATVITFTMLWKRVQA
>Mature_289_residues
PMARRTSLPVTFVVPTIAILLVLSMVPTLYAIVIALQNRELSTPDYSWVWLSNFVDLFLDRRFLNAVWVSVKWEIVTVVA
TMVVAIGLGVLMFEVASPRLRNVYCLLFIIPVLLPRVSAAFVWKFAYHPLYGIATYPYRLVTGGLIFDPLSKPGTALFAV
ASVDVWQWGLFFAVIVLKLLETLPPQPIEAARLDHAKRWQIHAYVTLPMLKAPLISLMFVKMIESLRSFDLIYVMTRGGP
GVATETLDMYAFSQGFIESGKVSYASAMAVLMMIATVITFTMLWKRVQA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=26.7857142857143, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787570, Length=249, Percent_Identity=27.3092369477912, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32604; Mature: 32472

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMARRTSLPVTFVVPTIAILLVLSMVPTLYAIVIALQNRELSTPDYSWVWLSNFVDLFL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DRRFLNAVWVSVKWEIVTVVATMVVAIGLGVLMFEVASPRLRNVYCLLFIIPVLLPRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AFVWKFAYHPLYGIATYPYRLVTGGLIFDPLSKPGTALFAVASVDVWQWGLFFAVIVLKL
HHHHHHHHCCHHHHHHCCHHHHCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
LETLPPQPIEAARLDHAKRWQIHAYVTLPMLKAPLISLMFVKMIESLRSFDLIYVMTRGG
HHHCCCCCCHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PGVATETLDMYAFSQGFIESGKVSYASAMAVLMMIATVITFTMLWKRVQA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PMARRTSLPVTFVVPTIAILLVLSMVPTLYAIVIALQNRELSTPDYSWVWLSNFVDLFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
DRRFLNAVWVSVKWEIVTVVATMVVAIGLGVLMFEVASPRLRNVYCLLFIIPVLLPRVSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AFVWKFAYHPLYGIATYPYRLVTGGLIFDPLSKPGTALFAVASVDVWQWGLFFAVIVLKL
HHHHHHHHCCHHHHHHCCHHHHCCCEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
LETLPPQPIEAARLDHAKRWQIHAYVTLPMLKAPLISLMFVKMIESLRSFDLIYVMTRGG
HHHCCCCCCHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC
PGVATETLDMYAFSQGFIESGKVSYASAMAVLMMIATVITFTMLWKRVQA
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]