Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474104

Identifier: 13474104

GI number: 13474104

Start: 3898379

End: 3899194

Strand: Direct

Name: 13474104

Synonym: mlr4910

Alternate gene names: NA

Gene position: 3898379-3899194 (Clockwise)

Preceding gene: 13474103

Following gene: 13474105

Centisome position: 55.41

GC content: 66.3

Gene sequence:

>816_bases
GTGCTCGAGGCCGCCGGCATCCAGCCGCCTAAGACGCTGGACGAACTGATCGCCGACGTGCCGAAGCTCACCAACCCGGA
CAAGGGCATGTATGGCATCGCGCTACGCGGCGCGCGCGGTTCGGGCGCCAATGTCTGGCGCTGGATGCCCTTCTTCAAGG
CCTATGGCGGCCAGTGGTTCGATGGCGACAAGCCGGTCTTCAATTCGGACGCCGCCGTCAAGGCGACCGAGACCTATCTG
AAGCTGTTCAAGGATTCGGCACCGGGCACGCAGACCGGCAGCTGGGATGAATCGACCGGCGCCTTCCTGTCGGGCCAGGT
CGCCATCCTCGTCGAATCGACGCCGCTGTCGGGCATGGCGGTCGATCCGAAGACCTCGCAGGTGGTCGGCAAGATCGGCT
TCCTGCCGCCGCCCTCGCCGCTGCCCGGCGGCGGTTACGGCCATGGCCTTGCCATCGCGGCGAAGGCCAATGCCGACGAT
GCCTCGAAGAAATGCGCCGGCCTGTTCATCGCCTGGGCGACGTCGAAGGAAAACGAGAAGCGCCGGCTCGACGCCCACCA
GTTCGGCGAGCTGAACCGCACCAGCATCCTGTCCAGCAAGGAGTTCGCCGGCATCTACGGCGCCGATCTCGGCCAGGCGC
TGGCCGAAACCGGCAAGGTCACCGCGGTCAACTTCTGGCAGGATCCGCGCTGGCCCGATCTCGGCGACCGCTGGGGCATC
ATCCTCGAGGAACTGGTCACCGGCACCCGCACCGACGTCAAGGGCGGCCTCAACGAGCTCGAGGCCTACGCCAACGAACT
GGCGAAGAAGAAATAG

Upstream 100 bases:

>100_bases
CGACTTCGATCCCGGCCGCCAGAAGGTCGCCACCTATGGCGGCAAGGTCTGGTTCGCGCCGCTGACCGGCGGCGGCGACC
TGATGGTCTACCGCAAGGAC

Downstream 100 bases:

>100_bases
AGCCATCCTCCCGCCCGTGGCGCGCGGTCCGCGGCATTGTACGCAATGCCGGGACCTGCGCGCCGCGGGGACTTTGCCGA
ACGAGGAAATCATGCCGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL
KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD
ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI
ILEELVTGTRTDVKGGLNELEAYANELAKKK

Sequences:

>Translated_271_residues
MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL
KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD
ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI
ILEELVTGTRTDVKGGLNELEAYANELAKKK
>Mature_271_residues
MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWFDGDKPVFNSDAAVKATETYL
KLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMAVDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADD
ASKKCAGLFIAWATSKENEKRRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI
ILEELVTGTRTDVKGGLNELEAYANELAKKK

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 28991; Mature: 28991

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
DGDKPVFNSDAAVKATETYLKLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCEE
VDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADDASKKCAGLFIAWATSKENEK
ECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCHH
RRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI
HHCCHHHCCCCCHHHHHCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
ILEELVTGTRTDVKGGLNELEAYANELAKKK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLEAAGIQPPKTLDELIADVPKLTNPDKGMYGIALRGARGSGANVWRWMPFFKAYGGQWF
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCCC
DGDKPVFNSDAAVKATETYLKLFKDSAPGTQTGSWDESTGAFLSGQVAILVESTPLSGMA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEECCCCCCEE
VDPKTSQVVGKIGFLPPPSPLPGGGYGHGLAIAAKANADDASKKCAGLFIAWATSKENEK
ECCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEEEEEECCCCCHH
RRLDAHQFGELNRTSILSSKEFAGIYGADLGQALAETGKVTAVNFWQDPRWPDLGDRWGI
HHCCHHHCCCCCHHHHHCCCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
ILEELVTGTRTDVKGGLNELEAYANELAKKK
HHHHHHCCCCHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]