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The map label for this gene is ycjP [C]

Identifier: 13474106

GI number: 13474106

Start: 3900170

End: 3901000

Strand: Direct

Name: ycjP [C]

Synonym: mlr4913

Alternate gene names: 13474106

Gene position: 3900170-3901000 (Clockwise)

Preceding gene: 13474105

Following gene: 13474107

Centisome position: 55.43

GC content: 63.66

Gene sequence:

>831_bases
GTGGAAGCGGGTGCAGGCATGAGGCCCGGCAGACTGATCGGCAAGGCAACATTGGCGCTGGCTGGGTTCCTGGCGGTGTT
TCCGCTGCTGTGGACGGCGCTCAATGCGCTGAAGAACAATGTCGACATCATCACCCGCGTGCCGCGGCTGGTGTTCACGC
CGACATGGGCCAACATCGGCTATATCCTCGGCCGCGACAGCGTGCTGACCGGGCTCTACAACTCGGTCGTCGCCTGCGGC
TCGGCCGTGTTGATCGGCATCGTGCTCGGCCTGCCGGCGGCTTACGCGGTGGCGCGCTATCCCAACCGCTGGGCCGGCGA
CATCCAGTTCTTCGTGCTGTCGCTGCGCTTCCTGCCACCCGTGGCGGTCGCCATTCCGCTGATGGTGATCTGGCTGCAGG
TCGGCCTCTACGATACTTTGCCGGCGCTGATCATCACCTATTCGCTGCTCACCATCTCGGTGATCATGTGGCTCGCCATC
CCCGCCTTCCAGAGCGTGCCGAAGGAGATCGAGGAAGCCGCCTTCGTCGATGGCTACGGCGCCTATTCGGTTTTCTGGCG
CATCGCGCTGCCTGTCGCCGCCCGCTCCCTGGCAGGGGCGGTCGCCTTCAGCTTCGTGCTGGTCTGGAACGAATTCCTGA
TCGCGCTGATGCTGTCGAGCTCCAACGCCAAGACCTTGCCGATCGTCGCCTCGGAACTCTCCCAGCAAGGCATGAACGTG
CCCTGGGGCATTCTCAACGCCTCGGTCGTGCTCCTGTCGCTGCCGCCGCTGCTGTTCCTTGGCGTGCTCAGCGGCTTCCT
GAATTCCGTTTTCCGGCAAAAAAAGACTTGA

Upstream 100 bases:

>100_bases
ACGCCTTCTCGCAAGGCTTCATCGAATCCGGCAAGGTCTCCTATGCCTCGGCCATGGCCGTACTGATGATGATCGCCACC
GTCATCACCTTCACCATGCT

Downstream 100 bases:

>100_bases
TGTGAGGATTTCCCGATGCGGGCACTGGTGCTTGAGAAAAAAGGCGAACTGTCGTTGCGCGAGATCGCGCTGCCGCTCGA
TGTCGGGCCGGATGATGTCA

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MEAGAGMRPGRLIGKATLALAGFLAVFPLLWTALNALKNNVDIITRVPRLVFTPTWANIGYILGRDSVLTGLYNSVVACG
SAVLIGIVLGLPAAYAVARYPNRWAGDIQFFVLSLRFLPPVAVAIPLMVIWLQVGLYDTLPALIITYSLLTISVIMWLAI
PAFQSVPKEIEEAAFVDGYGAYSVFWRIALPVAARSLAGAVAFSFVLVWNEFLIALMLSSSNAKTLPIVASELSQQGMNV
PWGILNASVVLLSLPPLLFLGVLSGFLNSVFRQKKT

Sequences:

>Translated_276_residues
MEAGAGMRPGRLIGKATLALAGFLAVFPLLWTALNALKNNVDIITRVPRLVFTPTWANIGYILGRDSVLTGLYNSVVACG
SAVLIGIVLGLPAAYAVARYPNRWAGDIQFFVLSLRFLPPVAVAIPLMVIWLQVGLYDTLPALIITYSLLTISVIMWLAI
PAFQSVPKEIEEAAFVDGYGAYSVFWRIALPVAARSLAGAVAFSFVLVWNEFLIALMLSSSNAKTLPIVASELSQQGMNV
PWGILNASVVLLSLPPLLFLGVLSGFLNSVFRQKKT
>Mature_276_residues
MEAGAGMRPGRLIGKATLALAGFLAVFPLLWTALNALKNNVDIITRVPRLVFTPTWANIGYILGRDSVLTGLYNSVVACG
SAVLIGIVLGLPAAYAVARYPNRWAGDIQFFVLSLRFLPPVAVAIPLMVIWLQVGLYDTLPALIITYSLLTISVIMWLAI
PAFQSVPKEIEEAAFVDGYGAYSVFWRIALPVAARSLAGAVAFSFVLVWNEFLIALMLSSSNAKTLPIVASELSQQGMNV
PWGILNASVVLLSLPPLLFLGVLSGFLNSVFRQKKT

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=184, Percent_Identity=29.8913043478261, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29752; Mature: 29752

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]